Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01604 ATGGCTAGATCTAAACGACGACGTTCGGGCATTGCTGCTAGCCATGTCAGACCGAAAATGATTTTTCAGCCTATTCTGGAGGATGGAGTGTTTCGTTTTGATTGTTCTGTAAAGGATAGAGAAGCAGCATCTCCCAGTATTTCTTTTTTGAATGGCAAGGACAGAGACACACCTATATCTACTGAGAAGGTTCCTGTGTATAACCCTACGTTTGAGATTCGATTAGAGCAGCAGATTGTCAAACTTGAGTTGCCTGTAGGTTCCTCCCTTTATGGAACTGGAGAAGTTAGCGGACAGCTTGAGAGGACGGGTCAAAGAGTTTTCACATGGAACACCGATGCATGGGGTTATGGATCTGGAAATACATCTTTGTACCAATCACACCCATGGGTGTTAGCTGTTCTTCCAAGTGGTGAGGGACTAGGAATCCTTGCCGACACTACAAGGCGCTGTGAGATTGATCTCAGGAAAGAATCAACAATACAGTTTGTTTCTCCATCTTCATATCCTGTCGTTACATTTGGTCCTTTTGCTTCACCCACTGAAGTGTTAAGTTCTCTATCAAAGCAATTAGGAACTGTATTTATGCCCCCGAAATGGTCTTTAGGCTATCATCAATGCCATTCGAGTTATTTATCTGATCAGAGAGTTCTGGAGGTTGCTAAAACGTTCCAGAAGAAGTGCATACCATGTGACGTGATATGGATGGATACTGATTACATGGATGGTCTTCGTGTTTTCACATTTGACAAGAAACGTTTCCAAGACCCCATGTCTTTGGTGAAAGATCTCCGTAGTAGTGGTTGTAAAGTCATTTGGATGCTTGATCCTGGAATCAAGCTGGAAGAGGGTTATTTTGTATATGACAGTGGTTCTAAAGATGATGTTTGGATCCAAAATGAAGATGGAACTCCTTTCATAGGGGAGGTGTGGCCTGGGCCTTGTGTCTTCCCCGACTATACTCAGTCAAAAGTTCGTGCATGGTGGGCAAATTTAGTCAAGGATTTCATTTCCAATGGTGTTGATGGTATATGGAATGATATGAACGAACCAACTATTTTTAAGGTTGAAACAAATACAATGCCTGATAGCAATGTTCATAGAGGAGATAGTGAACTTGGTGGGCGACAGAATCATTCTTTCTATCATAATGTGTATGGTCTTCTGATGGCAAGATCGACCTATGAAGGCATGAAACTAGCTAATGAAGAGAAACGTCCTTTTGTTCTTACAAGAGCTGGATTTATTGGCAGCCAACGGTATGCAGCAACATGGACTGGTGATAATCTTTCGACCTGGGAGCATCTTCATATGAGTATCTCCATGGTACTTCAGCTGGGACTTAGTGGTCAGCCATTTTCAGGTGCTGATATTGGTGGATTTGCTGGAAATGCTACACCTAAACTTTTTGGAAGGTGGATGGGTGTTGGTTCCTTGTTTCCCTTTTGCCGAGGGCATTCTGAAGCTTGCACCACTGATCATGTACCTTGGGCTTTTGGGGAAGAGTGTGAAGAAGTTTGCCGATTGGCATTGAAGAGGCGATACCGCCTAATCCCACTTATCTACACTCTTTTTTATTTTGCTCATACACGGGGCACTCCAGTGGCAACCCCTACTTTCTTTGCTGATCCAAAAGATCCTAGCCTGAGGAAGCTTGAAAATTCGTTTTTGCTCGGTCCAGTCTTAGTGTATGCAAGCACCATACATGCACAGGGGTTGGATAAATTGGAGATTACCTTGCCTAAGGGGATATGGTTGGGTTTTGATTTCGACGATGCACATCCGGATTTGCCAGCCTTATACTTGAAAGGTGGTTCTATTATTCCTGTGGGTCTCTCTCTTCAGCATGTTGAAGAAGCTAACCCTTCAGATGATTTGACTCTTCTCGTGGCTTTAGACGAACATGGAAAAGCTGAAGGTGTTCTTTTTGAGGATGATGGTGATGGATACGGATTCACAAAAGGCAATTATTTATTAACACATTATGTGGCTGATCTTAAATCATCAGTTGTTACTGTGAGTATACACAAAACGGAAGGATCATGGGAAAGGCCAAAACGGCGCCTGCATATTCAATTATTGCTGGGTGGGGGTGCAATGCTTGATACATGGGGAACTGATGGAGAAGTTCTGCAACTAATCTTGCCTTCTGAGGATGAGGTGTTGAAGCTAGTATCTACTAGTGAGAAGCATTACAAGGACCGCTTAGAAAGTGCAATTCCAATTCCTGATGTGGAAGAGGTTTCTGGACCCAAGAGAACAGAAATGGCTCTCATTGAACGGAGAAGTGACATAGAAGACCATGTTAGTCAGATGTCTAAGGAGGTGTCTATTCGGACTGATGGAGGAAATATTGAGACCGGTGATTCTAATGACCCATTTTATACTACGGAGGTTTTCCCTTCTCGAGACGCTATGCTGAATTGGGCTCGAGAAGTAGCAAAAGAGAATGGATTTGTCCTTACTATTTTGAGGTCAGAAACATGTACAAGAACTAATAAAAAGAATAACAAAGGGAAGACATATGTAATAATGGGCTGTGAAAGGAGTGGAAAATATAGACCATACAAGAATACATTATCTAAGGTGACTAGTACCAAAAAATGTGAGTGCCCCTTCAAGCTAAGGGCAAAAGCTTTGAAAAAGAATGAAAAATGGGTTGTTAAGGTAATGTGTGGTCGTCACAACCATGAATTAGGGGAAACATTGGTGGTAGGACATTCATATGCTGGCCGATTAAGTGCTGAAGAGAAGTCTTTAGTCATTGATATGACAAAAAACATGGTGGAGCCGAGAAACATACTACTAACATTGAAAGATCATAATAATGAGACTACTATTAGGCATATTTATAATGCTCGACAAGCTTATCGATCTTCTCAGAAAGGTCCTAGGACAGAAATGCAACAGCTACAAAAGTTATTGGAATATGATCAATATGTATATTGGAATAGAAAGATGGATGGTTCTGATGCTATCAGTGATATATTTTGGGCACATCCAGATGCCATCAAACTTCTAAGCGCTTTCCATACTGTCTTGCTCCTTGATAATACTTATAAAGTCAATAGGTATAAATTGCCACTACTTGAGATTGTTGGTGTTACTTCAACAGAGTTAACATTCTCTGTGGCATTTGCTTATCTAGAGTCTGAGCAAGTTGATAACTTCACTTGGGCACTGGAGAAGTTAAGAGAATTGATTGTCAAAGACAGTGAGATGCCTCCAGTAATTGTAACTGTAAGAGACACTGCTCTGATGGATGCAGTGCAGGCAGTCTTTCCGAGCTCTTCTAATTTGTTATGTCGTTTTCATATAATCAAGAATGTGAAGGCCAAATGCAAGATGATGGTTCATCCGAAGGAGCAATATGACTTGGTGATGGATGCATGGCACAATGTTATGAATTCTCCTAACGAGGGTGAGTATACGCATCGTTTGGCATTATTTGACAAAGTTTGCTCAGATTTTCCAAATTTTGGTGATTATGTGAAAAATACGTGGCTTACTCCTCATAAGGAAAAATTTGTCACGGCATGGATAGATCGAGTGATGCATTTGGGTAACACAACACTTAACAGATCGGAAACAGCACATTGGAGGTTGGAGAACTTGCTTGAAGATAGTGCGGGGGACATTTGTAGTTGTTGGGATGCTATAAATAACATGATTAAATTGCAACACAAGGAGATTAAAGTGTCATTTGAGAAAAGCATAAATACAGTGGAATACAATACTCCATTCTACAAAATGTTGGTGGGATTTGTATCAAGGAGTGCATTGAGTTATATATCTGATCAATATGACCGAATTAAGACCATTGGCACTGACAGTTCTATATGTGGTTGCACAATTAGAACTACACATGGTCTACCTTGTGCATGTGAACTTGCTAGGTACAATATACCCTTGCAGGTAGTTCAAGATCATGGCACTAGGTTCAATTCCAGTTTCCAAGAAATGAATGAAGAGGGGTCTGAAGTATCATTGCAATCAGTACCATTGCAGGCAATTCATATTCATTGGAGGAGGTTAAACTTCAGTGTCCAAGAAATGAGCGAAGAGGGGTCTGAGGTATCACTACAACGTGAAATTGATGCTTTGCACAAGCAATTTCAGGAACTTGATTATGCTGGAAAAGTTACTCTAAAGGCCAAATTGCGTGAACTAGCCTTGCCTGATATAACTTTAATGTGTTCAGCTCTGGAAAGGGTAAGAACAAATGATGCTCCACAGGATTTAGGATGGAAAAGAGATAAATCAGTTGAATGTGATCCTTTGTATTGGGAGCATATAGATTCACCGCATTCTGACCATTATTGCATCACTCACCCTTCATCTGAGAAACCAGTCCATGAGTCTAATAGCATGGAAGTTTTACCATCAATGGACCAAATTCAGGTTGAAGTTCATCCATTTAATGAAGGCATTGTAGATGTGAAAGCAGAAGAGAACTGTGGTTAG 4464 0.4097 MARSKRRRSGIAASHVRPKMIFQPILEDGVFRFDCSVKDREAASPSISFLNGKDRDTPISTEKVPVYNPTFEIRLEQQIVKLELPVGSSLYGTGEVSGQLERTGQRVFTWNTDAWGYGSGNTSLYQSHPWVLAVLPSGEGLGILADTTRRCEIDLRKESTIQFVSPSSYPVVTFGPFASPTEVLSSLSKQLGTVFMPPKWSLGYHQCHSSYLSDQRVLEVAKTFQKKCIPCDVIWMDTDYMDGLRVFTFDKKRFQDPMSLVKDLRSSGCKVIWMLDPGIKLEEGYFVYDSGSKDDVWIQNEDGTPFIGEVWPGPCVFPDYTQSKVRAWWANLVKDFISNGVDGIWNDMNEPTIFKVETNTMPDSNVHRGDSELGGRQNHSFYHNVYGLLMARSTYEGMKLANEEKRPFVLTRAGFIGSQRYAATWTGDNLSTWEHLHMSISMVLQLGLSGQPFSGADIGGFAGNATPKLFGRWMGVGSLFPFCRGHSEACTTDHVPWAFGEECEEVCRLALKRRYRLIPLIYTLFYFAHTRGTPVATPTFFADPKDPSLRKLENSFLLGPVLVYASTIHAQGLDKLEITLPKGIWLGFDFDDAHPDLPALYLKGGSIIPVGLSLQHVEEANPSDDLTLLVALDEHGKAEGVLFEDDGDGYGFTKGNYLLTHYVADLKSSVVTVSIHKTEGSWERPKRRLHIQLLLGGGAMLDTWGTDGEVLQLILPSEDEVLKLVSTSEKHYKDRLESAIPIPDVEEVSGPKRTEMALIERRSDIEDHVSQMSKEVSIRTDGGNIETGDSNDPFYTTEVFPSRDAMLNWAREVAKENGFVLTILRSETCTRTNKKNNKGKTYVIMGCERSGKYRPYKNTLSKVTSTKKCECPFKLRAKALKKNEKWVVKVMCGRHNHELGETLVVGHSYAGRLSAEEKSLVIDMTKNMVEPRNILLTLKDHNNETTIRHIYNARQAYRSSQKGPRTEMQQLQKLLEYDQYVYWNRKMDGSDAISDIFWAHPDAIKLLSAFHTVLLLDNTYKVNRYKLPLLEIVGVTSTELTFSVAFAYLESEQVDNFTWALEKLRELIVKDSEMPPVIVTVRDTALMDAVQAVFPSSSNLLCRFHIIKNVKAKCKMMVHPKEQYDLVMDAWHNVMNSPNEGEYTHRLALFDKVCSDFPNFGDYVKNTWLTPHKEKFVTAWIDRVMHLGNTTLNRSETAHWRLENLLEDSAGDICSCWDAINNMIKLQHKEIKVSFEKSINTVEYNTPFYKMLVGFVSRSALSYISDQYDRIKTIGTDSSICGCTIRTTHGLPCACELARYNIPLQVVQDHGTRFNSSFQEMNEEGSEVSLQSVPLQAIHIHWRRLNFSVQEMSEEGSEVSLQREIDALHKQFQELDYAGKVTLKAKLRELALPDITLMCSALERVRTNDAPQDLGWKRDKSVECDPLYWEHIDSPHSDHYCITHPSSEKPVHESNSMEVLPSMDQIQVEVHPFNEGIVDVKAEENCG 1487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01604 1487 CDD GH31_glucosidase_II_MalA 192 532 - -
Viun2g01604 1487 SUPERFAMILY (Trans)glycosidases 182 532 IPR017853 -
Viun2g01604 1487 Gene3D - 517 599 IPR013780 -
Viun2g01604 1487 Pfam Domain of unknown function (DUF5110) 626 694 IPR033403 -
Viun2g01604 1487 PANTHER ALPHA-GLUCOSIDASE 74 663 - -
Viun2g01604 1487 ProSitePatterns Glycosyl hydrolases family 31 active site. 343 350 IPR030458 -
Viun2g01604 1487 Gene3D Glycosidases 195 516 - -
Viun2g01604 1487 Gene3D glycosyl hydrolase (family 31) 39 175 - -
Viun2g01604 1487 Gene3D - 605 730 IPR013780 -
Viun2g01604 1487 Pfam Transcription factor AFT 841 899 IPR014842 GO:0000981|GO:0036086
Viun2g01604 1487 Pfam MULE transposase domain 1013 1109 IPR018289 -
Viun2g01604 1487 Pfam Glycosyl hydrolases family 31 179 608 IPR000322 GO:0004553|GO:0005975
Viun2g01604 1487 SUPERFAMILY Galactose mutarotase-like 70 160 IPR011013 GO:0003824|GO:0005975|GO:0030246
Viun2g01604 1487 Pfam Galactose mutarotase-like 89 154 IPR025887 -
Viun2g01604 1487 CDD GH31_N 70 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01604 Viun-Chr2 25888864 25904146 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01604 20 757 Glycoside Hydrolase AT3G23640 70.867 0.0 1134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Viun2g01604 Glyco_hydro_31 2.6e-126 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01604 - - vra:106777609 2843.53