Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01556 ATGAATCAATGCAATTCAGTAGTAAAGACGCCTCCCAAAATTAGCAAGTTAAGGCATCTAAGAACACTAAGCCTTTTCGTGGTGGGTTCAAAGCCAGGGTGCGGGTTAGCAGAGTTGCACAGCTTAAATCTGGGAGGTGCGCTGAGAATCAGAGGCCTTAACAACGTCCCCAGTGAATGGGATGCTAAACAAGCAAATCTGATTGGTAAGAAGGAGTTGAATATCCTGCACTTGTCATGGGATGGTAGTGCTAATTCAAAAAGTAGTAATGTTAGTGTGGAGAGAGTACTGGAAGCCCTGGAACCTCCGTCAACTCTGAAGAGTTTTGAGATGAATGGATATGAGGGAAAACAGCTATCCAGTTGGATGAGAAGTTCCATAGTTTTGAGAGACTTGGTGAAAGTTAAGCTCTGGAACTGTGAAAACTGTGAGGAGCTTCCCCCATTTGGTAAACTACCACACCTGAAAAGGCTAGAACTGAGTGGAATGAAAAATGTGAAGTGCATAGATGGTGAGACCTATGACGGTGCGGAGGAGAAGGCATTTCCATCGTTGGAGGAATTGAGTGTGGATAATTTACCAAATTTGGAGAGGTTGTTGAGGGATGAAAGAGTAGAGATGGTACCTCATCTTTTCGAATTAAGGATTGAGAGGGTCTCCAACCTTAAATGTCCACGTCTTCCTGCTGTTGAGAAACTTGATGCTCGAGGGATTGGCGAAGCGGCTTCCTTCATGGAAGTTGTGGGGAATACGGCTTGTCTAAAGACCTTGAGCATTGAATACATTAAAGGAGTGGTGGTATTACCCGAACAATTTAGCGGGTTGGGTGCACTACAGGATCTATACATTGCATATTGGTATGATGTGGAGTATTTCCCAGAACATGTCTTGGAGTGTCTAACTTCTCTTCGAACTTTGTCTATTATTTACTGTCATAAATTAAAATCCTTGTCTGAAGGTGTTCGACATTTGGCATGTCTTGAGAGATTGATAATCTACGGTTGTCCAGAGTTGGTGGTTCTACCAAGCAATATGAGCCAACTAACCGCCCTTCGAGTCGTGTCAATCTCTATTTGCTCCACATTACCAGATGGCTTACAACGTGTCCCCTCCCTACGTTGTTTGGAAATGTTGGAGTACAAGTCTACTTCATTGCCGGACTGGGTGGGAGATATATCTACTCTTGAAGAATTAAGCATCGAGTATTGTAAGGAGTTGAGGTCACTGCCTAGCAGCATTCAACGCCTCACCAACTTGTCTCGTTTAATCATACGCGGATGTCCTCTTCTTGAGAAGCGGTGCAAGAGGGAAACAGGAGAGGATTGGCAATACATAAAGCACATTCCAAATACAGAACTATTTGCATGA 1368 0.4371 MNQCNSVVKTPPKISKLRHLRTLSLFVVGSKPGCGLAELHSLNLGGALRIRGLNNVPSEWDAKQANLIGKKELNILHLSWDGSANSKSSNVSVERVLEALEPPSTLKSFEMNGYEGKQLSSWMRSSIVLRDLVKVKLWNCENCEELPPFGKLPHLKRLELSGMKNVKCIDGETYDGAEEKAFPSLEELSVDNLPNLERLLRDERVEMVPHLFELRIERVSNLKCPRLPAVEKLDARGIGEAASFMEVVGNTACLKTLSIEYIKGVVVLPEQFSGLGALQDLYIAYWYDVEYFPEHVLECLTSLRTLSIIYCHKLKSLSEGVRHLACLERLIIYGCPELVVLPSNMSQLTALRVVSISICSTLPDGLQRVPSLRCLEMLEYKSTSLPDWVGDISTLEELSIEYCKELRSLPSSIQRLTNLSRLIIRGCPLLEKRCKRETGEDWQYIKHIPNTELFA 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01556 455 SUPERFAMILY L domain-like 5 258 - -
Viun2g01556 455 Gene3D Ribonuclease Inhibitor 224 356 IPR032675 -
Viun2g01556 455 Gene3D Ribonuclease Inhibitor 1 216 IPR032675 -
Viun2g01556 455 Gene3D Ribonuclease Inhibitor 357 437 IPR032675 -
Viun2g01556 455 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 2 220 - -
Viun2g01556 455 SUPERFAMILY RNI-like 227 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01556 Viun-Chr2 25612134 25613501 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01556 273 432 WRKY Transcription Factor Family AT4G12020 30.625 1.43e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01556 - - vum:124833357 679.863