Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01548 ATGGCAGAGGCTTTACTGGGAATTGTGCTTGAAAATTTGGGATCTTTTGTTCAAGACCAACTTGCAACTTATTGGGGTGTTGAACAGCAGACTCATAAGCTTTCCAGCAACCTCACCGCAATTCGTGCTGTCCTCAGAGATGCTGAGAGAAAGCAAATAACAAGTCATGCCGTGAAGGATTGGCTGCAGAAACTCACGGATGCAGCGTACGTGCTTGATGATATCTTGGATGAATGTTCAGTTCAATCCAAAATGCTACACTCTGATGATGGACAAAGTTCATGCTTGGCCTATGTGCACCCTAAGCACATTCTCTGTCGTTTTTATATCGGAAAGAGGATGAAAGACATCACCCAGAGGTTTCATGACATTCATGAAGAAAGGCTCACGTTTGAATTGCGTGTGGGTGTCACGGAGAAGCAAACAGTCAATGATGATGATGATTGGCGTCAAACTAGCTCAGTCATTACTGAACCCATATTCTGTGGCAGAGACAAAGATCGAGAGAAAATTGTGAAATTTCTCGAGGAAGATGCTAGTGGCAGTGAAGACCTCACCATCTATCCCATAGTTGGTATGGGTGGTCTTGGCAAAACAACTCTTGCCAAGCAGGTATTCAATGATCACGAGATAAGTAAACATTTTGACTTGAGAATTTGGATCTGCGTTTCAGATGATTTCAATGTCAAGAGAATACTGCAATCGATTATAGAATGTAGTATTGGCCAAAATCCCAACCTCGGTGATTTAGAAGCAAGGAGAAAAAGGGTTGAAGAAGCATTGCAAAGCAAGAGGTATTTACTTGTTCTTGATGATGTGTGGAATGAAGACCGAGAGAAGTGGAAGGAGTTGAAGGGGATGTTGGAGTGTGCTAAGGGAGCAAAAGGAGCTACCATTTTGGTCACCACTCGACTTCAGGAAGTTGCCTCCATCATGGGAACGCATCCTGCTTACAGTTTGACAGCATTGTCAGAAGACGACAGTTGGTCGTTGTTCAAACACCATGCGTTTGGACTAAATAGAGAAGAAAGGGAAGAGTTTGTGACAATTGGCAAAGAGATAACGAGGAAATGCGTTGGTTCGCCACTTGCAATCAAAACACTGGGAAGCTGTTTGCGTAATGAAAATGAGATAAAGCAGTGGCAGAATATTAAGGAAAGTGAGATTTGGGATATACGGGAGGTAAGTAGTTCTCTGACAAATGACGAAAATGCTATCATGCGTGCTTTGAAATTAAGCTATTTTAATTTGGAGTTGTCATTGCGGAGATGCTTTTCTTTCTGTGCAATTTTCCCTAAAGATTTTGAAATTGATAGAGAAGAACTCATTCATCTCTGGATGGCTAATGGATTTATTAAACAGGAAGGGAATGTAGAGGTGGAGGATGTTGGTAATAAAGTGTGGAAAAGATTATATGATAGATCATTCTTCCAGGAAGCAAAGGCCAATAGGATTGGTATGATTAAAACTTTCAAGATGCATGATCTATTTCATGATCTCGCTCAGTCTATCATGGGTGAAGAATGTGTGGTTTACGAGGAAGGAAAGTTGACTCGATTGTCAAATAGAGTTCACTATTTACGATTGCTAAATTCTAATAAGTTTGTCGATATGGCTGCCTTCAAGAAAGTTGAATCATTTCGAACTTTACTTGATTTTGGTTTAGGATTGCATCATGTAAATATTCGTTTGTTGCCATCAAATCATTGTCTCCGAGCATTACACATACGATCAACTCTTTTTTCCCCACTAAATGATTTGTCACATTTGAGATATTTGAGTTTGCACAGGTGTTCAGTCTTGCATAGTTCTATTTGTGGGTTGCAGAAATTGCAAATACTGAAACTCGAAGATTGCGGAGGGTCGCATAATTTTTTTCCAGAACACATGACACAATTACAGGATCTTAGGCATCTTGTGATTAAGGGTTGTCCTAAAATAGCAGAGATGCTTCCGAATATTGGCAAGTTAGGGCATCTAAGAACATTGAACACCTTCGCCGTGGGTTCAAAACTGGAGTATGGGTTGGCAGAGTTACATGGCTTAAGTCTAGTTGGAAAACTGCATATCAGAGGCCTGGAGAATGTGAGCAATGAATGGGAGGCTAAAGAAGCAAATTTGATGAGCAAGAAGGAGTTGAATCGCCTATACTTATCATGGAGTGATAGTCCTAACTCACAAGGTAGTAATGTTAGTGTGGAGAGAGTCCTGGAAAACCTGGAACCTCCCTCAACTCTGAAGAGTTTTGGGATGAAAGGATATCTGGGAAGAAAGTTATCGAGTTGGATGAGAAGTGTTGTAGTTTTGAAAGACTTAGTGGAAGTTATGCTCTTCGACTGTTTCTTCTGTGAGGAGCTTCCTCCACTTGGTAAACTACCACATTTGAAAAGGGTAGACCTGCGTAGAATAAGAAATGTGAAGTGGATAGATGGTGAGTCGTATGAAGGTGTGGAGGAGAAGGCATTTCCATCGTTGGAGAAATTGAATGTGGAGAATTTACCAAATTTGGAGAGGTTGTTGAGGGATGAAGGAGTAGAGATGCTCCCTCGTCTTTCCCAAGTAAGAATTGATGGTGTCTTGAACTTTAAAGTCCCACATCTTCCGTGTGTTGAGGAGCTTGATGCTAGAGACATTAAGGCAGCGACTTCTTTCATGGAAGGGGTTGTGGAGAATGTGACTTGTCTGAAGAAACTGCTAATTGCATCCATGAGAGATTTGAAGGTACTGCCCGAAAAACTGAGCAGGCTGAGTGCACTACAGGATCTAAAGATATTGGAATGTGAAGAGTTGAGATCGCTGCCAAGTAGCTTTCAACGCCTCACCAACTTGTCTAAATTAAGTATTTTGAACTGTGATCGTCTGGAGGAGAGGTACAAAAGAGAAACAGGGAATGATTGGCAATTCATAGCTCACATTCCAAATGTAGAATTGGAATCCTTCCCCTCGCACGGAGTGAAACCGGCTTTATCATTTAGTGATCGTTACCGGCAATCATCTTGCTCATGGAACTGCTTCAAGGTTAAAAGACCGCCTGCTGAAACAGAAAGAATGGTTGAATATAATTTTTTTGACTACATGGATGAGTATGAGTGA 3093 0.4122 MAEALLGIVLENLGSFVQDQLATYWGVEQQTHKLSSNLTAIRAVLRDAERKQITSHAVKDWLQKLTDAAYVLDDILDECSVQSKMLHSDDGQSSCLAYVHPKHILCRFYIGKRMKDITQRFHDIHEERLTFELRVGVTEKQTVNDDDDWRQTSSVITEPIFCGRDKDREKIVKFLEEDASGSEDLTIYPIVGMGGLGKTTLAKQVFNDHEISKHFDLRIWICVSDDFNVKRILQSIIECSIGQNPNLGDLEARRKRVEEALQSKRYLLVLDDVWNEDREKWKELKGMLECAKGAKGATILVTTRLQEVASIMGTHPAYSLTALSEDDSWSLFKHHAFGLNREEREEFVTIGKEITRKCVGSPLAIKTLGSCLRNENEIKQWQNIKESEIWDIREVSSSLTNDENAIMRALKLSYFNLELSLRRCFSFCAIFPKDFEIDREELIHLWMANGFIKQEGNVEVEDVGNKVWKRLYDRSFFQEAKANRIGMIKTFKMHDLFHDLAQSIMGEECVVYEEGKLTRLSNRVHYLRLLNSNKFVDMAAFKKVESFRTLLDFGLGLHHVNIRLLPSNHCLRALHIRSTLFSPLNDLSHLRYLSLHRCSVLHSSICGLQKLQILKLEDCGGSHNFFPEHMTQLQDLRHLVIKGCPKIAEMLPNIGKLGHLRTLNTFAVGSKLEYGLAELHGLSLVGKLHIRGLENVSNEWEAKEANLMSKKELNRLYLSWSDSPNSQGSNVSVERVLENLEPPSTLKSFGMKGYLGRKLSSWMRSVVVLKDLVEVMLFDCFFCEELPPLGKLPHLKRVDLRRIRNVKWIDGESYEGVEEKAFPSLEKLNVENLPNLERLLRDEGVEMLPRLSQVRIDGVLNFKVPHLPCVEELDARDIKAATSFMEGVVENVTCLKKLLIASMRDLKVLPEKLSRLSALQDLKILECEELRSLPSSFQRLTNLSKLSILNCDRLEERYKRETGNDWQFIAHIPNVELESFPSHGVKPALSFSDRYRQSSCSWNCFKVKRPPAETERMVEYNFFDYMDEYE 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01548 1030 Pfam NB-ARC domain 165 414 IPR002182 GO:0043531
Viun2g01548 1030 PANTHER DISEASE RESISTANCE PROTEIN RP 37 928 IPR044974 GO:0006952
Viun2g01548 1030 CDD RX-CC_like 2 124 IPR038005 -
Viun2g01548 1030 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 147 428 IPR027417 -
Viun2g01548 1030 Gene3D - 145 316 IPR027417 -
Viun2g01548 1030 Pfam Rx N-terminal domain 6 87 IPR041118 -
Viun2g01548 1030 Gene3D Ribonuclease Inhibitor 866 962 IPR032675 -
Viun2g01548 1030 Gene3D Ribonuclease Inhibitor 680 865 IPR032675 -
Viun2g01548 1030 SUPERFAMILY L domain-like 481 958 - -
Viun2g01548 1030 Gene3D - 6 117 - -
Viun2g01548 1030 FunFam Probable disease resistance protein At1g63360 414 503 - -
Viun2g01548 1030 PRINTS Disease resistance protein signature 260 274 - -
Viun2g01548 1030 PRINTS Disease resistance protein signature 585 601 - -
Viun2g01548 1030 PRINTS Disease resistance protein signature 187 202 - -
Viun2g01548 1030 PRINTS Disease resistance protein signature 358 372 - -
Viun2g01548 1030 Gene3D - 420 503 IPR036388 -
Viun2g01548 1030 Gene3D - 322 418 IPR042197 -
Viun2g01548 1030 Gene3D Ribonuclease Inhibitor 522 679 IPR032675 -
Viun2g01548 1030 FunFam Probable disease resistance protein At1g61300 143 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01548 Viun-Chr2 25547481 25551437 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01548 184 664 WRKY Transcription Factor Family AT5G45050 22.500 1.55e-08 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01548 - - vun:114173437 2074.67