Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01541 ATGTCACTTGTCATAAATTTCTTAAAGGATATGGTACTGAAGTTTTCAGGTTCTTACAAGCAGTGCAGACCTTGCACAGGGTCCAGTACCTACAAGAAAGGACAGAGGCCATATCCCGACTTTGACACCATTTCAGAAGGGGTTCCATACCCCTATATTGGAGGAGCAAGCTCAGCTTCAACCCCTGCTTGGGACTTCACAAGCTCCTATTTACCTGGTGGTAGACCAGACCAAAGATTTATGGGTGGATTGAATGGTGATAGGACCTCTAGAGGGCCAGAGTCAGCACCAGCATGTGATGTAGTTGTTGAGGAAGAGGATGAAACCAAGGAATGGATGGCACAGGTGGAGCCAGGGGTTCACATTACCTTTGTTTCTCTCCCTAATGGGGGAAATGATCTCAAAAGAATTCGCTTCAGCCGAGAGATTTTTGACAAGTGGCAAGCTCAAAAATGGTGGGGTGAGAATTATGACAGAATCATGGAGCTTTACAATGTCCAGAGATTCAATCGACAAGCTCTTAACACTCCTTCCAGATCTGAGGATGAGCAAAGAGATTCTTCATACTCAAGACTGACATCTGGACAAGAAAGCCCGGGGTCGATGTCGTTGAAGGAATGGACACCAAGGAATCACTATAAACCCTCATTGAATAACCAATCTGAAGCCATGGATCAAGTTGGTGGTCAAAACTTCCCAGCAGGGTCATCTGTGGAAGCATCAAGGACAACCACTTCTTCTAGAGATGAGCCTTCAATGAGCAATGCCAGTGACCTGGAGGCAGAATGGATAGAGCAAGATGAACCTGGAGTGTACATTACGATCCGACAACTAGCTGATGGAACAAAGGAGCTGCGTCGTGTCAGATTCAGCCGGGAGAGATTTGGGGAGGGGCATGCAAAGAAATGGTGGGAAGACAACAGAGAAAGAATACAAGCTCAATACCTTTGA 951 0.4616 MSLVINFLKDMVLKFSGSYKQCRPCTGSSTYKKGQRPYPDFDTISEGVPYPYIGGASSASTPAWDFTSSYLPGGRPDQRFMGGLNGDRTSRGPESAPACDVVVEEEDETKEWMAQVEPGVHITFVSLPNGGNDLKRIRFSREIFDKWQAQKWWGENYDRIMELYNVQRFNRQALNTPSRSEDEQRDSSYSRLTSGQESPGSMSLKEWTPRNHYKPSLNNQSEAMDQVGGQNFPAGSSVEASRTTTSSRDEPSMSNASDLEAEWIEQDEPGVYITIRQLADGTKELRRVRFSRERFGEGHAKKWWEDNRERIQAQYL 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01541 316 MobiDBLite consensus disorder prediction 212 254 - -
Viun2g01541 316 MobiDBLite consensus disorder prediction 174 257 - -
Viun2g01541 316 ProSiteProfiles BRX domain profile. 261 316 IPR013591 -
Viun2g01541 316 ProSiteProfiles BRX domain profile. 110 165 IPR013591 -
Viun2g01541 316 PANTHER PROTEIN BREVIS RADIX-LIKE 1 8 316 IPR044532 -
Viun2g01541 316 MobiDBLite consensus disorder prediction 189 205 - -
Viun2g01541 316 Pfam Transcription factor regulating root and shoot growth via Pin3 110 164 IPR013591 -
Viun2g01541 316 Pfam Transcription factor regulating root and shoot growth via Pin3 260 315 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01541 Viun-Chr2 25511278 25515953 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01541 2 316 Major Intrinsic Protein MIP AT1G31880 64.396 1.24e-141 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01541 - - vum:124826203 621.313