Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01536 ATGGCTTCTTCAAGCTCTCTCTTGAGAATGGAACAGATACCAGGGAAAGGAAGAGGTATTGTTGCAGCAAAATCCCTGAAAGCAGGTGAAATAATCCTCACCGAATCCCCTCTCATTCTCTACTCAGCTTCTCCACTCTTCGCACCATCTTCATCACCTTTCACAAACTGTGATCACTGCTTCAGAATCTTACCCTCTCACACTAACATTTTCCCATGCCCCTCTTGCTCCCACCACACTTTCTGCTCCCAAAGGTGTCTCTCCCTTGCACGCAACTCCTCACACTCCACTTGGGTATGCAAAGCTCTCATCTTTCTTCTTCAACACCCCAACTCAACAACACTCTTTCAACAACACCCCCCAGAACGCCAAGTCCAAGCCCGTTTCATTGTAGCTTCTCACAACCTCTTTCTTCGTTCCCCTTCTGAACTTCACACCTTGCTCTCTCTTCATGGCACCCCAGACAGTGCCATTTTTGATGCTGCTAAGTTTCTCCACTCTCTGATCTCACCACTTTTCCCTCAACAGTGTCAACTTTCTGTTGATATCACTGCGCAGCTTCTTGCAAAGGACAGACTCAACTCCTTCTGCTTAATGGACCCTTATTCCCCCGAAGGGCCTCAGAGATCCATCAAAGCGTATGCTATTTACCCCAAAGCCACGTTCTTCAACCATGACTGTGTTCCCAACGCGTGCAGGTTCGATTATGTGGACACTGGTGACGAACACAACACCGACATGGTTATTAGGTTGATCGAGGATGTTCCTGCTGGGAAAGAGATCTGCATCAGCTATTTCAGGATTGGAAGGGATTATTGCACCAGAAAAAGGATCTTGATGGAGGATTATGGCTTCACTTGTGGATGTGATACGTGTGTGATCGAAGCAAAGGGAGAAGACAATGGGGAGAAGAACAGTGACCTGCCACACGTGCGGTTCCTTCGCAAGCATGTCTGTGAGAGGAAGAATTGTGCTGGCACAATGGCTCCTCTGCCTCCAAAAGATGATGTGCCTTCTAATGTTCTGGAGTGTAACTTCTGTGGCAATTTCAAAGAAATATTGTGA 1065 0.4723 MASSSSLLRMEQIPGKGRGIVAAKSLKAGEIILTESPLILYSASPLFAPSSSPFTNCDHCFRILPSHTNIFPCPSCSHHTFCSQRCLSLARNSSHSTWVCKALIFLLQHPNSTTLFQQHPPERQVQARFIVASHNLFLRSPSELHTLLSLHGTPDSAIFDAAKFLHSLISPLFPQQCQLSVDITAQLLAKDRLNSFCLMDPYSPEGPQRSIKAYAIYPKATFFNHDCVPNACRFDYVDTGDEHNTDMVIRLIEDVPAGKEICISYFRIGRDYCTRKRILMEDYGFTCGCDTCVIEAKGEDNGEKNSDLPHVRFLRKHVCERKNCAGTMAPLPPKDDVPSNVLECNFCGNFKEIL 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01536 354 Gene3D SET domain 19 292 IPR046341 -
Viun2g01536 354 Gene3D - 118 195 - -
Viun2g01536 354 CDD SET_SMYD 193 292 - -
Viun2g01536 354 Pfam SET domain 17 265 IPR001214 GO:0005515
Viun2g01536 354 SUPERFAMILY SET domain 8 292 IPR046341 -
Viun2g01536 354 Gene3D - 56 117 - -
Viun2g01536 354 SMART set_7 6 272 IPR001214 GO:0005515
Viun2g01536 354 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 299 352 IPR044238 -
Viun2g01536 354 ProSiteProfiles SET domain profile. 6 266 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01536 Viun-Chr2 25496005 25497389 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Viun2g01536 SET 1.2e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01536 - - gmx:100808530 572.392