Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01523 ATGCTGGTGAAGGTTTCTGCTCTGTCAGAAAACGACATTAATCTGAAATGGTTTGTTTTTTGTTCAGAGGCCACTCCAAAGTCTGTTCTGAGGTTAATGGGGTTGAAAGGCCTCACACTATATCATTTGAAGAGCCATTTACAGAAGTATAGACTTGGACAGCAGGCTCGAAAGCAAAACGAGGAACTGAACAAAGAGAACAGTAGATGTTCGTTTGTAAATTTTAGCAATCGTTCTTCAGGGCCTAACACCACTTACAGAGGTGATAATGAAGGGGGAGAAACCCCAATAGCAGAAGCACTGAGGCATCAGATTGAAGTTCAAAAGAGATTGGAAGAGCAGCTCGAGGTACAGAAGAAGTTGCAGATGAGAATAGAGGCTCAAGGGAAGTATTTGCAAGCAGTGTTAGAGAAAGCTCAGAGAACCCTTTCCTTGGATGGATCAGGAAGTATTGAAGCATCAAGAGCTCAGTTGACTGAATTCAACTCTGCTTTGTCAAATTTCATGGAAAATATGAATAAAGATAGCAAAGAAAACATAATAGAAGTGACTGACTTTTATAATAAGAACCATGGCTCAGCTTTCCATTATGAGGAAGTAGGGAGAGAACAAAATAGGGATCAAAAGCCCAAGATTGAAGGGGGTTCAATACAGTTTGACTTAAACATTAAGGGTAGCAATGATCTTGTATCTGCAGCTGGGGCTGAAATGGATGTCAATATGATTTCATATAGGGGTTAA 741 0.4022 MLVKVSALSENDINLKWFVFCSEATPKSVLRLMGLKGLTLYHLKSHLQKYRLGQQARKQNEELNKENSRCSFVNFSNRSSGPNTTYRGDNEGGETPIAEALRHQIEVQKRLEEQLEVQKKLQMRIEAQGKYLQAVLEKAQRTLSLDGSGSIEASRAQLTEFNSALSNFMENMNKDSKENIIEVTDFYNKNHGSAFHYEEVGREQNRDQKPKIEGGSIQFDLNIKGSNDLVSAAGAEMDVNMISYRG 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01523 246 Pfam MYB-CC type transfactor, LHEQLE motif 96 142 IPR025756 -
Viun2g01523 246 Gene3D - 5 55 - -
Viun2g01523 246 NCBIfam myb-like DNA-binding domain, SHAQKYF class 23 53 IPR006447 GO:0003677
Viun2g01523 246 Coils Coil 98 128 - -
Viun2g01523 246 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 23 186 IPR044848 GO:0003700
Viun2g01523 246 SUPERFAMILY Homeodomain-like 22 55 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01523 Viun-Chr2 25425356 25427555 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01523 46 245 G2-like Transcription Factor Family AT5G45580 43.868 5.25e-41 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Viun2g01523 Myb_CC_LHEQLE 7.9e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01523 - - gmx:100810146 386.341