Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01522 ATGGAAGGTGGAGGAGGAAGAGAAAGTTATAATGGGGTGGTGATGACTATGACACGAGACCCGAAGCCAAGGCTAAGATGGACATCAGATCTTCATGATCGCTTTGTGGATGCAGTCACAAAGCTTGGTGGCCCCGATAAGGCCACTCCAAAGTCTGTTCTGAGGTTAATGGGGTTGAAAGGCCTCACACTATATCATTTGAAGAGCCATTTACAGAAGTATAGACTTGGACAGCAGGCTCGAAAGCAAAACGAGGAACTGAACAAAGAGAACAGTAGATGTTCGTTTGTAAATTTTAGCAATCGTTCTTCAGGGCCTAACACCACTTACAGAGGTGATAATGAAGGGGGAGAAACCCCAATAGCAGAAGCACTGAGGCATCAGATTGAAGTTCAAAAGAGATTGGAAGAGCAGCTCGAGGTACAGAAGAAGTTGCAGATGAGAATAGAGGCTCAAGGGAAGTATTTGCAAGCAGTGTTAGAGAAAGCTCAGAGAACCCTTTCCTTGGATGGATCAGGAAGTATTGAAGCATCAAGAGCTCAGTTGACTGAATTCAACTCTGCTTTGTCAAATTTCATGGAAAATATGAATAAAGATAGCAAAGAAAACATAATAGAAGTGACTGACTTTTATAATAAGAACCATGGCTCAGCTTTCCATTATGAGGAAGTAGGGAGAGAACAAAATAGGGATCAAAAGCCCAAGATTGAAGGGGGTTCAATACAGTTTGACTTAAACATTAAGGGTAGCAATGATCTTGTATCTGCAGCTGGGGCTGAAATGGATGTCAATATGATTTCATATAGGGGTTAA 813 0.4194 MEGGGGRESYNGVVMTMTRDPKPRLRWTSDLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQKYRLGQQARKQNEELNKENSRCSFVNFSNRSSGPNTTYRGDNEGGETPIAEALRHQIEVQKRLEEQLEVQKKLQMRIEAQGKYLQAVLEKAQRTLSLDGSGSIEASRAQLTEFNSALSNFMENMNKDSKENIIEVTDFYNKNHGSAFHYEEVGREQNRDQKPKIEGGSIQFDLNIKGSNDLVSAAGAEMDVNMISYRG 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01522 270 Gene3D - 21 79 - -
Viun2g01522 270 FunFam Myb family transcription factor 21 79 - -
Viun2g01522 270 MobiDBLite consensus disorder prediction 96 114 - -
Viun2g01522 270 Pfam Myb-like DNA-binding domain 25 75 IPR001005 -
Viun2g01522 270 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 79 IPR017930 -
Viun2g01522 270 Pfam MYB-CC type transfactor, LHEQLE motif 120 166 IPR025756 -
Viun2g01522 270 SUPERFAMILY Homeodomain-like 22 79 IPR009057 -
Viun2g01522 270 Coils Coil 122 152 - -
Viun2g01522 270 NCBIfam myb-like DNA-binding domain, SHAQKYF class 22 77 IPR006447 GO:0003677
Viun2g01522 270 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 13 209 IPR044848 GO:0003700
Viun2g01522 270 MobiDBLite consensus disorder prediction 96 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01522 Viun-Chr2 25424810 25427555 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01522 13 191 G2-like Transcription Factor Family AT3G24120 52.941 1.32e-59 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Viun2g01522 Myb_DNA-binding 4.1e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01522 - - gmx:100810146 475.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g01522 2 25424810 25427555 Viun2g01522 2 25424810 25427555 ECH