Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01521 ATGGAAGGTGGAGGAGGAAGAGAAAGTTATAATGGGGTGGTGATGACTATGACACGAGACCCGAAGCCAAGGCTAAGATGGACATCAGATCTTCATGATCGCTTTGTGGATGCAGTCACAAAGCTTGGTGGCCCCGATAAGGCCACTCCAAAGTCTGTTCTGAGGTTAATGGGGTTGAAAGGCCTCACACTATATCATTTGAAGAGCCATTTACAGAAGTATAGACTTGGACAGCAGGCTCGAAAGCAAAACGAGGAACTGAACAAAGAGAACAGATGTTCGTTTGTAAATTTTAGCAATCGTTCTTCAGGGCCTAACACCACTTACAGAGGTGATAATGAAGGGGGAGAAACCCCAATAGCAGAAGCACTGAGGCATCAGATTGAAGTTCAAAAGAGATTGGAAGAGCAGCTCGAGGTACAGAAGAAGTTGCAGATGAGAATAGAGGCTCAAGGGAAGTATTTGCAAGCAGTGTTAGAGAAAGCTCAGAGAACCCTTTCCTTGGATGGATCAGGAAGTATTGAAGCATCAAGAGCTCAGTTGACTGAATTCAACTCTGCTTTGTCAAATTTCATGGAAAATATGAATAAAGATAGCAAAGAAAACATAATAGAAGTGACTGACTTTTATAATAAGAACCATGGCTCAGCTTTCCATTATGAGGAAGTAGGGAGAGAACAAAATAGGGATCAAAAGCCCAAGATTGAAGGGGGTTCAATACAGTTTGACTTAAACATTAAGGGTAGCAATGATCTTGTATCTGCAGCTGGGGCTGAAATGGATGTCAATATGATTTCATATAGGGGTTAA 810 0.4198 MEGGGGRESYNGVVMTMTRDPKPRLRWTSDLHDRFVDAVTKLGGPDKATPKSVLRLMGLKGLTLYHLKSHLQKYRLGQQARKQNEELNKENRCSFVNFSNRSSGPNTTYRGDNEGGETPIAEALRHQIEVQKRLEEQLEVQKKLQMRIEAQGKYLQAVLEKAQRTLSLDGSGSIEASRAQLTEFNSALSNFMENMNKDSKENIIEVTDFYNKNHGSAFHYEEVGREQNRDQKPKIEGGSIQFDLNIKGSNDLVSAAGAEMDVNMISYRG 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01521 269 Pfam Myb-like DNA-binding domain 25 75 IPR001005 -
Viun2g01521 269 Coils Coil 121 151 - -
Viun2g01521 269 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 13 208 IPR044848 GO:0003700
Viun2g01521 269 MobiDBLite consensus disorder prediction 96 113 - -
Viun2g01521 269 Pfam MYB-CC type transfactor, LHEQLE motif 119 165 IPR025756 -
Viun2g01521 269 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 79 IPR017930 -
Viun2g01521 269 MobiDBLite consensus disorder prediction 96 117 - -
Viun2g01521 269 SUPERFAMILY Homeodomain-like 22 79 IPR009057 -
Viun2g01521 269 Gene3D - 21 79 - -
Viun2g01521 269 FunFam Myb family transcription factor 21 79 - -
Viun2g01521 269 NCBIfam myb-like DNA-binding domain, SHAQKYF class 22 77 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01521 Viun-Chr2 25424807 25427593 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01521 13 190 G2-like Transcription Factor Family AT3G24120 53.226 2.55e-60 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Viun2g01521 Myb_DNA-binding 4.1e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01521 - - gmx:100810146 469.159