Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01512 ATGGCAGCTTGCACTGTGTACTCAACACAATCTCTGAGCACAAACTGCTCCATCTCAACCCCATCAAAAACACAGCTGAGTTTTCACCAAAAGCAGGTAGTGTTCTACACCACAAGCAGGAGGAACAGCAAGAGGGGCAGCAACAGTGGCAGAAGCTATGTGATAACATGTGCAGCCAGTGACCAACAGACAGTGGTGATTGGTCTTGCTGCTGATTCAGGTTGTGGAAAAAGTACCTTCATGAGGAGGCTCACCAGTGTGTTTGGAGGAGCTGCAGAACCTCCAAAGGGTGGCAACCCTGATTCCAACACTCTCATCAGTGACACCACCACTGTTATATGCTTGGATGATTACCACTCTTTGGATAGAACTGGCAGAAAGGAGAAGGGTGTCACTGCTCTTGACCCTAGAGCCAATGATTTTGATCTCATGTATGAACAAGTTAAAGCAATCAAAGATGGAATTGCTGTTCAAAAACCAATCTACAACCATGTCACTGGTCTCTTGGACCCCCCTGAGCTCATTAAACCTCCCAAAATCTTAGTCATTGAAGGTTTGCACCCAATGTTTGATTCCCGCGTCAGAGACCTCTTGGACTTTAGCATCTACCTAGACATTAGCAATGAGGTGAAATTCGCTTGGAAAATTCAGAGAGACATGGCAGAGCGTGGACACAGTCTTGAAAGCATCAAGGCTAGCATTGAAGCAAGAAAGCCTGATTTTGAAGCATACATTGATCCACAAAAGCAATATGCAGATGCTGTGATAGAAGTGTTGCCAACTCAACTGATTCCAGATGACAATGAGGGTAAGATTTTAAGAGTGAGATTGATACAGAAAGAGGGAGTTAATTTCTTCAGTCCAGTTTACTTGTTCGATGAGGGCTCTACCATTTCATGGATTCCATGTGGAAGGAAGCTTACATGCTCCTACCCTGGCATCAAATTCTCCTATGGACCAGACACTTACTACGGAAATGAGGTGTCAGTTGTAGAAATGGATGGACAATTTGACAGATTAGATGAACTAATATACGTTGAGAGTCACCTGAGCAACCTCTCTACGAAGTTCTATGGAGAGGTTACTCAACAGATGTTGAAGCATGCTGATTTCCCCGGCAGCAACAATGGCACAGGTCTCTTCCAAACCATCGTTGGTTTGAAGATAAGAGATTTATATGAACAGATAGTAGCCACCAGGGCTGAGACTGCAGTAGCTGCAAAAGCTTAG 1230 0.4447 MAACTVYSTQSLSTNCSISTPSKTQLSFHQKQVVFYTTSRRNSKRGSNSGRSYVITCAASDQQTVVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRANDFDLMYEQVKAIKDGIAVQKPIYNHVTGLLDPPELIKPPKILVIEGLHPMFDSRVRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDFEAYIDPQKQYADAVIEVLPTQLIPDDNEGKILRVRLIQKEGVNFFSPVYLFDEGSTISWIPCGRKLTCSYPGIKFSYGPDTYYGNEVSVVEMDGQFDRLDELIYVESHLSNLSTKFYGEVTQQMLKHADFPGSNNGTGLFQTIVGLKIRDLYEQIVATRAETAVAAKA 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01512 409 FunFam Phosphoribulokinase 61 291 - -
Viun2g01512 409 PANTHER URIDINE KINASE 57 311 - -
Viun2g01512 409 CDD PRK 66 355 - -
Viun2g01512 409 Pfam Phosphoribulokinase / Uridine kinase family 66 264 IPR006083 GO:0005524|GO:0016301
Viun2g01512 409 PRINTS Phosphoribulokinase family signature 180 198 IPR006082 GO:0005524|GO:0005975|GO:0008974
Viun2g01512 409 PRINTS Phosphoribulokinase family signature 215 232 IPR006082 GO:0005524|GO:0005975|GO:0008974
Viun2g01512 409 PRINTS Phosphoribulokinase family signature 71 88 IPR006082 GO:0005524|GO:0005975|GO:0008974
Viun2g01512 409 PRINTS Phosphoribulokinase family signature 233 256 IPR006082 GO:0005524|GO:0005975|GO:0008974
Viun2g01512 409 ProSitePatterns Phosphoribulokinase signature. 215 228 IPR006082 GO:0005524|GO:0005975|GO:0008974
Viun2g01512 409 Gene3D - 61 301 IPR027417 -
Viun2g01512 409 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 335 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01512 118 292 PRT Gene Family AT3G27440 25.281 1.32e-14 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01512 K00855 - gmx:100777515 751.51