Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01478 ATGGGCAGCAGTGAGATGGATAAAGCTCCAAAAGAGAAGGAGTCAAAGACGCCACCACCTACATCACAGGAGCAGGCTTCAACCACCGCTACTGGAACAATTAATCCTGATTGGCCTGGATTTCAGGCATATTCTCCTATACCTCCACACAGTTTCTTGGCATCAAGTCCACAGGCTCACCCTTATATGTGGGGTGTCCAGCAATTTATGCCTCCCTATGGTACTCCACCACATCCATATGTTGCAATGTATCCACCTGGTGGCATTTATGCTCATCCATCCATGCCTCCGGGATCCTATCCTTTTAGCCCCTTTGCTATGCCTTCTCCAAATGGCATTGCTGAGGCTTCAGGAAACACTCCTGGCAGCATGGAAGCCGATGGTAAGCCTCCTGAGGTGAAGGAAAAATTGCCAATCAAAAGATCAAAAGGAAGTTTGGGTAGTTTGAATATGATCACAGGGAAAAGTAATGAACATGGTAAAACAACGGGGACATCTGCTAATGGAATTCATTCAAAGAGTGGTGATAGTGCAAGTGAAGGCGAAGGTACTAGTGAAGGAAGTGACGCAAATTCTCAAAATGACTCTCAATTGAAATCAGGGGGCAGGCAGGATTCTTTTGAAGATGAACCATCTCAAAATGGCACTTCAGCATATACTCCTCAAAATGGGGGCCTAAGTGCACCTCCTACTGTGGTCAATCAAACTCTGCCTATCATACCTATCTCTGCAGGTGGTGCTCCTGGAGCTGTTCCTGGTCCCACAACAAACTTAAATATAGGAATGGATTATTGGGGTACACCAGCTTCTTCCAACATTCCTGCACTTGCTAGAAAGGTTCCATCTACTGCAGTTGCTGGATCACGGGATAATGTTCAATCACAACTCTGGCTACAGGATGAAAGAGAGCTTAAAAGGCAAAGGCGAAAGCAGTCTAACAGGGAATCTGCTCGCAGATCCAGGTTGCGTAAGCAGGCCGAGTGTGATGAGTTAGCTCAGCGTGCTGAGGCTTTGAAGGAAGAAAATGCTTCTCTCAGGTCAGAAGTAAGTCGAATCAGGAGTGATTATGAGCAACTACTCTCCGAGAACACTGCTCTCAAGGAAAGACTTGGGGAACTACCTGCGAAAGATGATCATCAAAGGTCTGGGAGGAATGATGAACATGTGGGTAATGACGCTCAACAGAATGGGCAGACAGAGGGTGTGCAGGGTGGTCACTAG 1221 0.4676 MGSSEMDKAPKEKESKTPPPTSQEQASTTATGTINPDWPGFQAYSPIPPHSFLASSPQAHPYMWGVQQFMPPYGTPPHPYVAMYPPGGIYAHPSMPPGSYPFSPFAMPSPNGIAEASGNTPGSMEADGKPPEVKEKLPIKRSKGSLGSLNMITGKSNEHGKTTGTSANGIHSKSGDSASEGEGTSEGSDANSQNDSQLKSGGRQDSFEDEPSQNGTSAYTPQNGGLSAPPTVVNQTLPIIPISAGGAPGAVPGPTTNLNIGMDYWGTPASSNIPALARKVPSTAVAGSRDNVQSQLWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENASLRSEVSRIRSDYEQLLSENTALKERLGELPAKDDHQRSGRNDEHVGNDAQQNGQTEGVQGGH 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01478 406 MobiDBLite consensus disorder prediction 1 42 - -
Viun2g01478 406 CDD bZIP_plant_GBF1 306 356 IPR045314 GO:0003700|GO:0006355
Viun2g01478 406 MobiDBLite consensus disorder prediction 146 232 - -
Viun2g01478 406 MobiDBLite consensus disorder prediction 111 232 - -
Viun2g01478 406 MobiDBLite consensus disorder prediction 389 406 - -
Viun2g01478 406 MobiDBLite consensus disorder prediction 284 327 - -
Viun2g01478 406 Pfam G-box binding protein MFMR 1 96 IPR012900 -
Viun2g01478 406 MobiDBLite consensus disorder prediction 369 388 - -
Viun2g01478 406 MobiDBLite consensus disorder prediction 19 38 - -
Viun2g01478 406 SMART brlzneu 301 365 IPR004827 GO:0003700|GO:0006355
Viun2g01478 406 Pfam bZIP transcription factor 301 363 IPR004827 GO:0003700|GO:0006355
Viun2g01478 406 Coils Coil 321 369 - -
Viun2g01478 406 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 397 IPR044827 GO:0003700|GO:0006355|GO:0043565
Viun2g01478 406 MobiDBLite consensus disorder prediction 1 18 - -
Viun2g01478 406 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 303 366 IPR004827 GO:0003700|GO:0006355
Viun2g01478 406 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 308 323 IPR004827 GO:0003700|GO:0006355
Viun2g01478 406 Pfam Disordered region downstream of MFMR 135 274 - -
Viun2g01478 406 Gene3D - 304 358 - -
Viun2g01478 406 MobiDBLite consensus disorder prediction 367 406 - -
Viun2g01478 406 SUPERFAMILY Leucine zipper domain 304 360 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01478 Viun-Chr2 25109834 25121544 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01478 1 385 bZIP Transcription Factor Family AT2G35530 62.438 7.02e-164 464
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun2g01478 MFMR_assoc 2.1e-58 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01478 K09060 - gmx:778122 731.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g01478 2 25109834 25121544 Viun2g01478 2 25109834 25121544 ECH