Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01477 ATGGCACCACCACTAACAGACTCGGAACCAGAATCTGAAGCGCTGCGCCTCAAGGCCATGGCGGAGTCCAAGTTCAAAGCCTCAAACAACGCCAAATCCGCTCTCAAATACGCGAAGCGCGCGCAGCGTCTGTGCCCGCACCTCGCCGGCGTGTCGGAGGCCGTTACTTCGCTCACTGTCCTCGCCGCGCCGGACTGGTATAGTGCGCTGGGCGCTGAGCCCTTTGCAAACAGCAGCGTCATTCGGAGACAGTACAAGAAGCTCGCGCTGCTCCTCCACCCCGACAAGAACCCCAACGTGGCGTCGGAGGAGGCCTTCAAGCTCGTCGGCGAGGCCTTCCACCTCCTTTCCGACCGGAGTCGCCGCCGAGAGTACGACGCCGAGCTCCGACGGAAGATCAAGGCGGAGAGCGAGACGTTTTGGACCGCCTGCTCCACTTGCAGGCTCCTTCACCAGTTCCAGAGAAAGTATATGGGTCAAGAATTGGTGTGTCCGAGTTGTGAGAAGAGTTTTAAGGCTGTGGAAACGGTTCAGAGTGATGGGGATGGTGATGGGGAAGGTAGGGTTAGGAGTAGGAGGTTGAAGTTGAAAGAGATAAATAAAAAGAAGGAGAAAATTGGTGTGGAAGGGAGAGTGGATAATGAAGTGGGGGATGAGAAGGAAGGGAAATTGAGGAAGAGAATGCGTTCAGTTGGGGAGGTGTTGGAGAGGTCCAAACCTAGTAAAAGGGTTAAAAATGGGGAGGAAATGATGACATTAGCTGAATTTCAGACTGAGGTGAGGAGGAAGTTGCAGGAAAAGAAGTTGAAGGAAAAAGAAAAGGAAAAAGAAGATGATAGAATTGAGACGAGAACCAGCCAGGGGGAGAGGCGGCGGGCATTGAAAAACTTTGAAGGTTTAGAAAAGGAAAAGGAGGATGATAGAATTGAGACGAGAAACAACCAGGGGGAGAGGCGGCGGGCATTGAAAAACTTTGAAGGTTTAGAAAAGGAAAAGGAGGATGATAGAATTGAGACGAGAAGCAACCAGGGGGAGAGGCGGCGGGCATTGAAAAACTTTGAAGGTTTAGAGGTTGGAGAGGGGAGGGCTTTGAAGAAGAGTGCGACGCTTGCGATTGAGGAGAAGCGTGTGGGTTTATCGAAGAGGAAGGGGTTGAGATCTGCGAGGCATAGGGATTCTGATAAAGGGGAGTTGGAAAATATGGCGGTGGTGGATTCAGATTTTTATGATTTTGACAAAGATAGAGTGGAAAGGAGTTTTAAGAAAGGTCAGCTGTGGGCAGTGTATGACGATGACGATGGAATGCCAAGGAATTATGCCTTGATTGATGAAATTCTTTCACTGAATCCTTTTGAAGTGAGATTAAGTTGGTTGGATGTACAGATCAGTGGGGATGGGAGGATAGTTAGTAGGGAGAAAATGGGGTTTCATATACCTTGTGGGAGATTTAAGGTTGCCAGGAAGACTTCGGTGAATTCGGTAAATATATTTTCCCATGTTGTGGATTGTGACCGGGCAGCACGTGAGCTTTACAAAATTTACCCCAAGAAAGGCTCAGTATGGGCGCTGCATGGCGAGGGAAGTATTGATGCAGAGGAGCGCAAGAGATGCTATGACATTGTTATATGTCTGACAAGTTACAATGAGGCAAATGGTCTGAGCATGGCGTATCTTGAGAAGGTTGATGGTTACAAGACAGTATTTAGGCGGCAAGAGAATGGGAGTGGTGCTATTATATTTCTTGGGAAGGATGACATGTGCTTAGTTTCTCATCAGATTCCAGCACGGAAGCTTATTTGTGATGAAACTCCTGAACTGTTGAAAGACTGTTGGGAACTTGATCCCGCCTCACTTCCTTCAGATTTACTTACTATTGGTGGCATTGATAATTGA 1893 0.486 MAPPLTDSEPESEALRLKAMAESKFKASNNAKSALKYAKRAQRLCPHLAGVSEAVTSLTVLAAPDWYSALGAEPFANSSVIRRQYKKLALLLHPDKNPNVASEEAFKLVGEAFHLLSDRSRRREYDAELRRKIKAESETFWTACSTCRLLHQFQRKYMGQELVCPSCEKSFKAVETVQSDGDGDGEGRVRSRRLKLKEINKKKEKIGVEGRVDNEVGDEKEGKLRKRMRSVGEVLERSKPSKRVKNGEEMMTLAEFQTEVRRKLQEKKLKEKEKEKEDDRIETRTSQGERRRALKNFEGLEKEKEDDRIETRNNQGERRRALKNFEGLEKEKEDDRIETRSNQGERRRALKNFEGLEVGEGRALKKSATLAIEEKRVGLSKRKGLRSARHRDSDKGELENMAVVDSDFYDFDKDRVERSFKKGQLWAVYDDDDGMPRNYALIDEILSLNPFEVRLSWLDVQISGDGRIVSREKMGFHIPCGRFKVARKTSVNSVNIFSHVVDCDRAARELYKIYPKKGSVWALHGEGSIDAEERKRCYDIVICLTSYNEANGLSMAYLEKVDGYKTVFRRQENGSGAIIFLGKDDMCLVSHQIPARKLICDETPELLKDCWELDPASLPSDLLTIGGIDN 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01477 630 Coils Coil 290 310 - -
Viun2g01477 630 Coils Coil 253 282 - -
Viun2g01477 630 Coils Coil 318 338 - -
Viun2g01477 630 CDD DnaJ 65 118 IPR001623 -
Viun2g01477 630 ProSiteProfiles dnaJ domain profile. 65 129 IPR001623 -
Viun2g01477 630 SMART dnaj_3 64 121 IPR001623 -
Viun2g01477 630 Pfam Domain of unknown function (DUF3444) 400 599 IPR024593 -
Viun2g01477 630 MobiDBLite consensus disorder prediction 267 319 - -
Viun2g01477 630 Pfam DnaJ domain 65 126 IPR001623 -
Viun2g01477 630 Gene3D DnaJ domain 52 147 IPR036869 -
Viun2g01477 630 PRINTS DnaJ domain signature 101 121 IPR001623 -
Viun2g01477 630 PRINTS DnaJ domain signature 85 100 IPR001623 -
Viun2g01477 630 PRINTS DnaJ domain signature 67 85 IPR001623 -
Viun2g01477 630 PANTHER BNAC03G44070D PROTEIN 11 619 - -
Viun2g01477 630 SUPERFAMILY Chaperone J-domain 57 130 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01477 Viun-Chr2 25105706 25108194 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01477 5 178 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 30.732 1.29e-21 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01477 - - ccaj:109800659 847.04