Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01429 ATGGGAAGATCACCGCGTCGTGAGGAGATTAGTGGTGTGAAGAAAGGACCATGGACACCAGAAGAAGATGAGAAGCTGGTTGATTATATCACCAAACACAGCCATGGCAGTTGGAGAACACTTCCAAAGCGTGCAGGGCTGAATAGATGTGGTAAGAGCTGCAGATTAAGGTGGACAAACTATCTGAGGCCTGATATCAAGAGAGGCCAATTCACTGAAGAAGATGAGAGAATTATCATCAACCTTCATTCAGTTCTCGGAAACAAGTGGTCGAAGATTGCGGCTCATCTACCAGGACGAACTGATAATGAGATAAAGAATTATTGGAACACTCACATAAGGAAGAAGCTTCTAAAGATGGGCATTGATCCAGAAACTCACAAGCCAAGAACAGACTTTAATCACCTCATGAGTCTTTCTCAGTTGCTTGGCATGTCAAACTTGAGCAGTGTTATGAGTAGTACTTGGGGCAATAACAATCTTGGTTTGCAACCAGACATCACTCAGCTAGCAAAAATTCAACTGCTGCAAAATCTCTTGCAACTTATGAACAGCAATTCATTTGTTAACATGGGTAACCCTTACCTCTTTGGCAATCCCAACCTGAACCCTTTATTTCTGAACGGCACAAACCCCCTCCAAGCTAAGGAGCCTGTGGTGTTGAGTGGTAGTGAAAGATTTGGTAACCCTAGTGTGTACTCTCAAGCACAAAGTGAGTGCTCAAAATCATTGGCAGATGTGGAGGGTGGATCCATTCCACAAGATCTTGATTACAGCAAAATTAGCAGCATCAACACCAATCATTCGCGGGAAAATCAAGAAGAAAACCCTCTCCCTGCATTAGTTGCTGCCTCTCCGAGGATGGGAACCTTAAACCAAATGGACAGTGGTTGTGGTAACTTAGCACAAACGAACGCAGAGTCACCTTCGAACACATTCTTTGATGATTGGGAGAAGTTGCTTGATGATGAAAGAAGCGGTTCCTATTGGAAAGAGATTCTAGAATTTACACCCACTTCTGCATCACCGATTATGTGGTAG 1041 0.4361 MGRSPRREEISGVKKGPWTPEEDEKLVDYITKHSHGSWRTLPKRAGLNRCGKSCRLRWTNYLRPDIKRGQFTEEDERIIINLHSVLGNKWSKIAAHLPGRTDNEIKNYWNTHIRKKLLKMGIDPETHKPRTDFNHLMSLSQLLGMSNLSSVMSSTWGNNNLGLQPDITQLAKIQLLQNLLQLMNSNSFVNMGNPYLFGNPNLNPLFLNGTNPLQAKEPVVLSGSERFGNPSVYSQAQSECSKSLADVEGGSIPQDLDYSKISSINTNHSRENQEENPLPALVAASPRMGTLNQMDSGCGNLAQTNAESPSNTFFDDWEKLLDDERSGSYWKEILEFTPTSASPIMW 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01429 346 Gene3D - 69 135 - -
Viun2g01429 346 CDD SANT 71 113 IPR001005 -
Viun2g01429 346 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Viun2g01429 346 Gene3D - 14 67 - -
Viun2g01429 346 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 259 - -
Viun2g01429 346 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Viun2g01429 346 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Viun2g01429 346 Pfam Myb-like DNA-binding domain 68 112 IPR001005 -
Viun2g01429 346 SMART sant 14 64 IPR001005 -
Viun2g01429 346 SMART sant 67 115 IPR001005 -
Viun2g01429 346 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
Viun2g01429 346 FunFam MYB-related transcription factor 14 67 - -
Viun2g01429 346 FunFam Transcription factor MYB39 70 131 - -
Viun2g01429 346 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
Viun2g01429 346 CDD SANT 17 62 IPR001005 -
Viun2g01429 346 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01429 Viun-Chr2 24783454 24785189 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01429 1 335 MYB Transcription Factor Family AT5G16770 47.977 7.84e-93 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Viun2g01429 Myb_DNA-binding 4.8e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01429 K09422 - gmx:778082 529.635