Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01424 ATGGCCCCTTCTTTCGACACAACCACTCAAACAGTTTGCGTCATGGACGCTTCCGGCCACCTAGGTTTCAACCTCGTCCAGCGACTCCTCCACCGAGGCTACACCGTTCATGCCTCTATCCAAAAATATGGCGACGAAGACCTATTCAATGGGATTTCCGCCGACTCTAATAAGCTCAAGATTTTTCGATCTGACCCATTCGATTACCATAGCATAATCGAGGCACTCCGAGGCTGCTCTGGCTTGTTCTACACGTTCGAACCTCCCCATGACCAACCAAATTATGACGAATACATGGCAGACGTGGAAGTAAGAGCTGCACACAACGTGGTGGAAGCCTGTGCCCAGACAGAGACCATGGATAAAGTGGTTTTTACTTCCTCAGCAACCGCAGTAGTTTGGAGAGAGGATCGCAAGACCATGGAACTGGATCTGGATGAAAGACATTGGAGTGATGTTAATTTCTGTCGCAAATTCAAGTTATGGCACGGTGTGTCGAAGACAATGGCTGAGAAAAGTGCGTGGGCCTTAGCAATGGACAGAGGAGTGAATATGGTGTCCATCAACGCTGGCTTATTGATGACTCATGATCTCTCCATCCAACACCCTTACCTCAGAGGAGCTGCTGAGATGTACGAGGATGGTGTTTTCGTCACCGTTGATTTACCTTTCTTGGTGGATGCCCACATCTGCGTCTACGAAGAAGTCTCATCCTACGGTCGTTATTTGTGTTTTAATCACATCATCAACACCCACGACGACGCCGTTCAGTTAGCTCAAAAGTTGACTCCTGCTGCTGGTTCTTCTTCTTCGTCTTCGTCCTCTCCCTCGCCGCAGAGTGGTGACCTCGGTAAGGGTTTTATCGAACAGAAAATTAGCAACAAGAAGTTGAACAAATTGATGGTGAACTTCGAAGCTTGA 921 0.481 MAPSFDTTTQTVCVMDASGHLGFNLVQRLLHRGYTVHASIQKYGDEDLFNGISADSNKLKIFRSDPFDYHSIIEALRGCSGLFYTFEPPHDQPNYDEYMADVEVRAAHNVVEACAQTETMDKVVFTSSATAVVWREDRKTMELDLDERHWSDVNFCRKFKLWHGVSKTMAEKSAWALAMDRGVNMVSINAGLLMTHDLSIQHPYLRGAAEMYEDGVFVTVDLPFLVDAHICVYEEVSSYGRYLCFNHIINTHDDAVQLAQKLTPAAGSSSSSSSSPSPQSGDLGKGFIEQKISNKKLNKLMVNFEA 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01424 306 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 264 IPR036291 -
Viun2g01424 306 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 10 272 - -
Viun2g01424 306 Gene3D - 4 306 - -
Viun2g01424 306 CDD FR_SDR_e 12 302 - -
Viun2g01424 306 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 14 172 IPR002225 GO:0003854|GO:0006694|GO:0016616
Viun2g01424 306 MobiDBLite consensus disorder prediction 265 281 - -
Viun2g01424 306 MobiDBLite consensus disorder prediction 265 285 - -
Viun2g01424 306 FunFam Cinnamoyl-CoA reductase-like SNL6 isoform A 4 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01424 Viun-Chr2 24723786 24726483 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01424 10 304 Monolignol Biosynthesis Gene Families AT5G58490 29.808 4.61e-38 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01424 - - pvu:PHAVU_002G140100g 578.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g01424 2 24723786 24726483 Viun2g01424 2 24723786 24726483 ECH