Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01419 ATGGCAATTGAAAACCACGACACCGCTGTCAGAGAAATCAAGCCCAAGAACAGGAGAATCATGGGTGCTGGAGGCCCTGATGATGAGGACAATAGGTGGCCACCGTGGTTGAAGCCACTGCTCAAAGAGAGCTTCTTTGTTCAATGCAAGTTACATGCTGATTCTCACAAGAGTGAATGCAACATGTATTGCTTGGACTGTATGAACGGCCCACTCTGCTCTCTCTGCCTCGCCCACCACAAGGATCACCGTGCAATCCAGATTAGGAGGTCCTCCTACCATGATGTGATCAGGGTTTCTGAGATTCAGAAGGTGTTGGACATCACTGGTGTCCAAACCTACATTATCAACAGCGCAAGGGTGGTGTTTTTGAACGAGAGGCCTCAGCCAAGGCCAGGAAAAGGGGTCACAAACACATGTGAAGTCTGCGAGCGAAGCCTTCTTGATTCTTACCGCTTCTGTTCTCTTGGTTGCAAGATTGTTGGAACATCTAAGAACCAACAGAAGAAGAAGAAGCAGTCAACGGCAATGTCATCAGATTCTGAGGATTCATACAGCAGCAACAGCGTCCATGGCCTGCAGAAAAACTGCAAAGTTCAGAGCTTCACACCCTCCACACCACCTCCAACTTCGGTTAATTACAGAACTGCCAAGAGAAGAAAGGGAATACCGCACCGAGCCCCAATGGGGGGACTAATCATAGAGTACTAG 711 0.4866 MAIENHDTAVREIKPKNRRIMGAGGPDDEDNRWPPWLKPLLKESFFVQCKLHADSHKSECNMYCLDCMNGPLCSLCLAHHKDHRAIQIRRSSYHDVIRVSEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSYRFCSLGCKIVGTSKNQQKKKKQSTAMSSDSEDSYSSNSVHGLQKNCKVQSFTPSTPPPTSVNYRTAKRRKGIPHRAPMGGLIIEY 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01419 236 Pfam PLATZ transcription factor 89 160 IPR006734 -
Viun2g01419 236 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 27 229 - -
Viun2g01419 236 MobiDBLite consensus disorder prediction 167 213 - -
Viun2g01419 236 MobiDBLite consensus disorder prediction 167 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01419 Viun-Chr2 24685975 24688384 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Viun2g01419 PLATZ 7.3e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01419 - - gmx:100797900 449.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g01419 2 24685975 24688384 Viun2g01419 2 24685975 24688384 ECH
Viun2g01419 2 24685975 24688384 Viun3g03104 3 37345205 37347510 PCT