Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01394 ATGGGAGATGTGGCAAAGGACCTAACTGCTGGGACTATTGGAGGGGTGGCGCAACTAATAGTTGGCCACCCATTTGACACCATAAAGGTCAAGCTCCAAAGCCAGCCTACACCCCTCCCGGGCCAGCTTCCGAGATATTCTGGTGCAATTGATGCTGTCAAGCAGACGGTGGCAGCTGAAGGTCCAAGGGGTTTATACAAGGGTATGGGAGCCCCACTTGCCACAGTAGCAGCCTTCAATGCTGTTCTGTTTTCAGTTAGGGGGCAAATGGAAACATTACTGAGGTCGCATCCTGGTGCTACTCTCACAGTAAATCAGCAGATTGTTTGTGGAGCTGGAGCTGGAATTGCTGTTTCCTTTCTAGCTTGCCCTACTGAATTGATCAAATGCAGATTGCAAGCACAAAGTGCATTAGCTGGCACTGGAGCAGCAACCATGGCAGTGAAATATGGGGGACCCGTGGATGTGGCCAGGCAAGTTCTCAGGTCAGAAGGGGGCATAAGAGGTCTGTTCAAGGGCATGGTTCCCACCATGGCTCGTGAAGTACCTGGAAATGCTGCATTGTTTGGTGTATATGAAGCACTAAAGCAATTACTTGCTGGTGGCACTGATACCTCAGGACTGGATAGAGGTTCTCTGTTGCTTGCTGGAGGCTTGGCTGGAGGTGCTTACTGGCTCGCAGTTTACCCAACTGATGTTATTAAGAGTGTGATTCAAATAGATGATTACAAAAACCCCAAGTTCTCTGGTTCAATTGATGCTTTCAGAAGAATTTCAGCTACTGAGGGGTTCAAAGGCCTGTATAAGGGTTTTGGTCCAGCAATGGCCCGAAGTGTTCCTGCTAATGCAGCTTGCTTCTTGGCATATGAGATGACAAGATCAGCTCTTGCATAA 894 0.4877 MGDVAKDLTAGTIGGVAQLIVGHPFDTIKVKLQSQPTPLPGQLPRYSGAIDAVKQTVAAEGPRGLYKGMGAPLATVAAFNAVLFSVRGQMETLLRSHPGATLTVNQQIVCGAGAGIAVSFLACPTELIKCRLQAQSALAGTGAATMAVKYGGPVDVARQVLRSEGGIRGLFKGMVPTMAREVPGNAALFGVYEALKQLLAGGTDTSGLDRGSLLLAGGLAGGAYWLAVYPTDVIKSVIQIDDYKNPKFSGSIDAFRRISATEGFKGLYKGFGPAMARSVPANAACFLAYEMTRSALA 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01394 297 Gene3D Mitochondrial carrier domain 2 100 IPR023395 -
Viun2g01394 297 Gene3D Mitochondrial carrier domain 101 297 IPR023395 -
Viun2g01394 297 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 4 296 - -
Viun2g01394 297 Pfam Mitochondrial carrier protein 102 200 IPR018108 -
Viun2g01394 297 Pfam Mitochondrial carrier protein 4 95 IPR018108 -
Viun2g01394 297 Pfam Mitochondrial carrier protein 214 296 IPR018108 -
Viun2g01394 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 208 295 IPR018108 -
Viun2g01394 297 FunFam mitochondrial carnitine/acylcarnitine carrier-like protein 2 296 - -
Viun2g01394 297 SUPERFAMILY Mitochondrial carrier 3 290 IPR023395 -
Viun2g01394 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 93 IPR018108 -
Viun2g01394 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 102 198 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01394 Viun-Chr2 24509228 24512788 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01394 22 296 Antiporters AT1G79900 32.734 2.09e-40 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01394 K15109 - gmx:100787332 523.472