Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun2g01381 | ATGTCGCCGCCGGCGGTGGTAACAGAGGAGGATGGGCTGAGCAAGGTGTCGTCGACTGTAGCTTCTGGTTCTTCGCAGTCCTTGGATTGTTTCTCTCAGAATGGGGCTGGATTGAAAGAAAGGAATTACTTAGGGTTGTCTGATTGCTCATCAGTGGATAGCTGTGCTTCTACTGTGCCAGGCTTGGGTGATGAGAAAAAGGAGAACATGAATTTGAAGGCTACGGAGTTGAGGCTGGGTCTTCCCGGGTCACAGTCACCTGAAAGGGATCCGGATCTTTTCTCTTTAAGCTCAGCAAAGCTCGACGAGAAGCCACTGTTCCCTTTGGTTCCTACTAAAGACGGGATTTGCTTGTCGTCCCAGAAAACTGTTGTTTCCGGCAACAAGAGAGGTTTTGCTGATACCATGGATGGGTTTTCTCAGGGGAAGTTTACTGGTAATACGGGGATGAACGCAATGCTATCACCTAGGCCTTCTGGTGCTCAGCCTTCTGCAATGAAAGAAATTCCAAGCAAGTTGCAAGAACGGCCTTGTTCAGCTAATAATGGAACCAGTCATAACCATACAGGTGCTTCTATAAGTGGCAGTGCACCGGCTTCTAAGGCACAGGTTGTCGGTTGGCCTCCTATAAGATCATTTAGGAAAAACTCCATGGCCACCACATCCAACAAGAACAATGATGAAGTGGATGGAAAACCAGGTGGTGGTGCTCTCTTCGTGAAGGTCAGCATGGATGGTGCTCCCTATCTTAGGAAAGTAGATCTAAGAAGTTATTCAACATATCAGGAGCTATCTTCTGCACTTGAGAAGATGTTCAGCTGTTTTACCTTAGGTCAGTGTGGTTCCCATGGAGCTCCAGGAAGAGAAATGTTGAGTGAGAGTAAGCTGAGGGATCTTCTGCACGGTTCAGAGTATGTCGTCACTTATGAAGATAAAGATGGAGACTGGATGCTTGTAGGGGATGTACCATGGGAAATGTTCATTGATACTTGCAAAAGGCTGAAAATTATGAAGGGTTCTGATGCCATTGGCTTAGCTCCCAGGGCCATGGAAAAGTCCAAAAGCAGGACTTAG | 1074 | 0.4711 | MSPPAVVTEEDGLSKVSSTVASGSSQSLDCFSQNGAGLKERNYLGLSDCSSVDSCASTVPGLGDEKKENMNLKATELRLGLPGSQSPERDPDLFSLSSAKLDEKPLFPLVPTKDGICLSSQKTVVSGNKRGFADTMDGFSQGKFTGNTGMNAMLSPRPSGAQPSAMKEIPSKLQERPCSANNGTSHNHTGASISGSAPASKAQVVGWPPIRSFRKNSMATTSNKNNDEVDGKPGGGALFVKVSMDGAPYLRKVDLRSYSTYQELSSALEKMFSCFTLGQCGSHGAPGREMLSESKLRDLLHGSEYVVTYEDKDGDWMLVGDVPWEMFIDTCKRLKIMKGSDAIGLAPRAMEKSKSRT | 357 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun2g01381 | 357 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Viun2g01381 | 357 | MobiDBLite | consensus disorder prediction | 175 | 199 | - | - | |
Viun2g01381 | 357 | MobiDBLite | consensus disorder prediction | 214 | 228 | - | - | |
Viun2g01381 | 357 | Pfam | AUX/IAA family | 75 | 348 | IPR033389 | - | |
Viun2g01381 | 357 | MobiDBLite | consensus disorder prediction | 155 | 201 | - | - | |
Viun2g01381 | 357 | MobiDBLite | consensus disorder prediction | 12 | 26 | - | - | |
Viun2g01381 | 357 | PANTHER | AUXIN-RESPONSIVE PROTEIN IAA17 | 70 | 344 | IPR003311 | GO:0005634|GO:0006355 | |
Viun2g01381 | 357 | FunFam | Auxin-responsive protein | 232 | 349 | - | - | |
Viun2g01381 | 357 | Gene3D | - | 234 | 351 | - | - | |
Viun2g01381 | 357 | ProSiteProfiles | PB1 domain profile. | 237 | 341 | IPR000270 | GO:0005515 | |
Viun2g01381 | 357 | MobiDBLite | consensus disorder prediction | 213 | 233 | - | - | |
Viun2g01381 | 357 | SUPERFAMILY | CAD & PB1 domains | 234 | 338 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun2g01381 | Viun-Chr2 | 24412121 | 24416456 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun2g01381 | 239 | 342 | B3 DNA Binding Superfamily | AT5G37020 | 32.692 | 6.00e-08 | 52.8 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | AUX/IAA | Viun2g01381 | AUX_IAA | 7.3e-91 | CL0072 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun2g01381 | K14484 | - | gmx:547502 | 667.922 |