Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01357 ATGGCTTCACGAGCAGAGACAGAGCATCCCAACAAGGCATTTGGATGGGCAGCAAGGGACACTTCTGCCATTCTCTCCCCTTTCAACTTCTCCAGAAGGGCAACAGGGGAGAAAGATGTTGCAATTAAAGTAATGTACTGTGGAATATGTCACTCAGACTTACATATGTTAAAGAATGTCTGGGGCTGTTCAATCTATCCTATTGTTCCTGGGCACGAGGTTTCCGGTGTGGTGACAGAAGTGGGAAGCAAGGTGCAAAAGTTCAAAGTTGGAGACAGAGTTGGTGTGGGGGGCATGGCTGGATCCTGTAACTCATGTCAGAACTGTAGTGAAGGTCTTGAGAATTACTGTCCCAAAATGATTTTCACATACAGTGGGAAGTATGTTGATGGCACCATAACATACGGAGGCTACTCTGACTCAATGGTTGTAGATGAACACTTTGTGGTTCGCATTCCAGATAGCCTACCTCTTGATGCTGCTGCACCTCTCCTGTGTGCTGGAATCTCAGTGTATAGCCCTTTGAAATATTATGGACTTGACAAGCCTGGACTTCATATTGGTGTGGTTGGTCTTGGTGGACTTGGTCACATGGCTGTCAAGTTTGCCAAAGCTCTTGGACTTAAGGTCACCGTAATTAGTATCTCCCAACAAAAGAAGGAAGCCATTGAACACATGGGAGCTGATTCATTTGTTGTTAGCCGTGAACAAGATGAGATGATGGCTGTTATGGGAACCTTTGATGGAATCATTGACACAGTTTCTGCTGATCATTCTCTCGTGCCTTTGATTGGCCTGTTGAAGGCTCATGGTAAATTAGTCATGATTGGTGCACCAGAGAAGCCTCTGGAGGTTCCAGCATTTTCCTTACTTACGGGGAGGAAGATGGTTGGTGGCAGTGCAATTGGAGGGATGAAAGAGACGCAAGAAATGATCGATTTTGCTGCGAAGCATGATGTGAAACCTGATATCGAAGTTATTGAAATGGATTATGTGAACACTGCAATGGAACGCCTCCTCAAAGCAGATGTGAAGTATCGATTTGTTATTGATATTGGAAACACGTTGAAGCCAAGTTCCTGA 1083 0.4497 MASRAETEHPNKAFGWAARDTSAILSPFNFSRRATGEKDVAIKVMYCGICHSDLHMLKNVWGCSIYPIVPGHEVSGVVTEVGSKVQKFKVGDRVGVGGMAGSCNSCQNCSEGLENYCPKMIFTYSGKYVDGTITYGGYSDSMVVDEHFVVRIPDSLPLDAAAPLLCAGISVYSPLKYYGLDKPGLHIGVVGLGGLGHMAVKFAKALGLKVTVISTXSQQKKEAIEHMGADSFVVSREQDEMMAVMGTFDGIIDTVSADHSLVPLIGLLKAHGKLVMIGAPEKPLEVPAFSLLTGRKMVGGSAIGGMKETQEMIDFAAKHDVKPDIEVIEMDYVNTAMERLLKADVKYRFVIDIGNTLKPSS 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01357 361 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Viun2g01357 361 PANTHER ALDEHYDE REDUCTASE 6 356 IPR047109 GO:0016616
Viun2g01357 361 FunFam Putative cinnamyl alcohol dehydrogenase 6 324 353 - -
Viun2g01357 361 CDD CAD1 14 352 IPR047109 GO:0016616
Viun2g01357 361 Pfam Alcohol dehydrogenase GroES-like domain 38 151 IPR013154 -
Viun2g01357 361 Pfam Zinc-binding dehydrogenase 194 317 IPR013149 -
Viun2g01357 361 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 322 IPR036291 -
Viun2g01357 361 Gene3D - 167 323 - -
Viun2g01357 361 FunFam Cinnamyl alcohol dehydrogenase 167 323 - -
Viun2g01357 361 Gene3D - 16 353 - -
Viun2g01357 361 SUPERFAMILY GroES-like 24 184 IPR011032 -
Viun2g01357 361 FunFam Uncharacterized protein 16 166 - -
Viun2g01357 361 SMART PKS_ER_names_mod 17 351 IPR020843 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01357 Viun-Chr2 24208909 24215385 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01357 12 360 Monolignol Biosynthesis Gene Families AT4G37990 69.914 4.50e-170 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01357 K23232 - gmx:100809071 588.186