Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01352 ATGGATCCGATTCAATCGAACGATATTCAGGAATACCCACAAACCCTAATCTCAGAGCCCAGCGATTCTCTAATGCAAGATGCCAATGAGTCTGTGTTCGATTCGATGGTTTGCGACTCCACTTCAAGGCTCATCACAACTGGATTTACCAAAAAAACAGAAGAGGAATGTTTCATGTTTGTAAATGCTGGAGGGGATGCTTTCAGTGAAGCAGCTGGAGGAATAACGTTCCTGGGCGACACCTATTTTGATGGTGGCAACGTTATGCGGACCAACGAGCGAATAGTGGAGGGTGGAGACTACCCATTTATCTATCAATCGGCTCGGTTGGGAAGTTTTTGTTATAGGTTTGAAAATATTCCTCCTGGAGACTATGTTGTTGATCTTCATTTTGTGGAAATCATTAACATAAATGGGCCAAAAGGAATGAGGGTGTTCAATGTATACATCCAAGATGAAAAGGTTCTGTCTGAATTGGACATCTATGCAATTGTTGGAGCCAATAAGCCTCTACAGTTGGTTGATTCAAGTGTATCTGTTAAGGATGATGGGGTGATTCTCATAAGATTTGAAGGTATATCTGGAAGCCCAGTCGTAAGTGGAATTTGCATTAGGAGAGCAACGAAGGCCTCAGTTCCACAAGTGACAAGTGATCACATTGAATGTAGCTACTGTGCTGCACAGATTGAAATTCCTTCATCACAGATGAAACTTATGCAGGCAAAGTCTATCGCAAAGTATGAGAGTAAGATAAAGGAGCTCACAATGCAGTGTGATCTTAAGGCAAAAGAATGCTATGAGGCATGGATGTCATTAACTGTGACAAATGAGCAATTGGAGACAGTCCAGATGGAACTTGACAAAGTGACAATTAAGTCACATACTACTGATCAAACTGTGGAGAAACAAGCTGAAAGCCTGAGGAATATTTCTAATATGTATGAGCTTGATAAGAAGAAATGGGCAGATGCAATTTGCAGTTTACAAGAAAAGATAAAGTTGATGAAAAGTGATTATTTAAAACTTTCCTTTGAAGCGCATGAATGTGTTGATTCGATTCCTGAATTAAATAATATGGTTTTTGCAGTTCAGGAATTGGTCAAACAGTGTGAAGATCTCAAAGTGAAGTACAACGAAGAGATGACAAAGAGAAAGAAACTCTTCAACGAAGTTCAAGAGGCTAAAGGGAACATTCGGGTTTTCTGCCGATGCCGTCCATTGAATAAGGCTGAAATGTCAGCTGGATACAATACGGTTGTGGATTTTGATGCAGCAAAGGATGGATGCCTTGGAATTTTGACAAGTGGCTCCGTCAAAAAATCATTCAGATTTGACAGAGTTTATACACCAAAAGATGATCAAGTTGATGTTTTTGCTGATGCATCATCAATGGTAATCTCTGTACTGGATGGCTACAATGTTTGTATCTTTGCTTATGGGCAAACCGGAACAGGGAAAACGTTTACCATGGAAGGAACACAGCAGAACAGAGGAGTAAATTACAGGACTCTTGAGCACTTGTTTAAAGTTAGTAAGGAAAGGAGTGAAACTTTTTCATATAACATATCTGTTAGTGTTCTTGAGGTTTATAACGAACAAATCAGAGACTTATTGGCTACTGGACAAACATCAAAAAGATTGGAGATAAAACAAGCTTCTGAAGGATATCATCATGTTCCTGGTGTAGTAGAAGCCAAAATTGATAGCATAAATGAAGTGTGGAGTGTACTGCAGACCGGAAATAATGCTAGAGCAGTTGGAAGTAACAACGTTAATGAGCATAGCAGTCGATCTCATTGCATGCTATGTATAACAGTAAAGGCTAAAAACTTGTTGAATGGAGACTGTACCAAGAGCAAGCTTTGGCTCGTGGATTTGGCAGGTAGTGAGAGACTTGCAAAGACTGATGCTCAAGGGGAACGGCTTAAGGAAGCACAAAATATTAATCGATCTCTTTCTGCTCTTGGAGATGTAATATCTGCTTTGGCAGCTAAAAGTAGTCACATTCCATATAGGAACTCTAAACTCACACATTTACTTCAAGACTCACTAGGAGGTGACTCCAAAACTCTGATGTTTGTACAAATAAGTCCATCAGACCAGGACCTAGGTGAGACCCTGAGCTCGCTTAATTTTGCAACTAGAGTGAGGGGTGTTGAGTTAGGCCCTGTTAAGAGGCAAATTGATACAAGTGAACTTCAAAAGTTGAAAGCAATGCTCGAAAAAGCACGGAGTGATTGCAGAATTAAAGATGAATCTATGCGAAAACTTGAAGAAAACTTGCAAAGCTTGGAGAGTAAGGCCAAAGGCAAGGACCAGATTTACAAAAATTTACAAGAAAAGATTAAAGAACTTGAAGGACAGATTGAGTTGAAGAAAGCCATGCAAAGTGAATCAGAGAAGCAAGTCTCTCAATTATCTGACAAATTGAGAGGGAAAGAAGAAACCTGCAGTTCTCTCCAACAAAAGGTGAGAGAGCTAGAGAAAAGGATGAAAGAACAACTGCAGTCAGAGTCAGCAAGTTTTCAGCAGAAGGTTTGGGATCTAGAGAAAAGGCTGAAAGATCAGATGCACGAGTCTGACTCTGAATCTGCCATTTTGAAAGATAAGATAAAGGAGCTTGAGAGGAAACTGAAAGAGCAGGAGAAGAGCTCAATGGTCATGCTTCATCAACAGATGAAGGAATTAGAGGACAGATACAGAGAGCGAGAGCAACAGTGGCAACAAACACACAGTTATGTGGATGCAGTAAGGGCCACACCGGATATAGGTAAAAGCTTCATGAATGAAGAATGTCCAAGCGAGATTGAGGCTGGCATTTTAAGGTGTTCAGACTCAGTAAACCGGCAGACAAGCCAAGGTTCTTCTTTGTTCAAAGGAAGTGATTCTACTAATAAGATAAGAAGCAGAACAAGAGAGTTCAGAAGCAATGACGAAAACAACTACGTAATGTCTTCATCATCATTGCACGATAGAAGAAGAGTCACTAGGAAATCTGATCCACCCAAAATAATCAGGAGTGTGAGGCCAACACCAAGACCAGCCACTGGTAATCAAGCTCCAGTGTCTCACAAGAGAACTAGCACAAGCAGAGATCAGGTTCCAGGAATAAGAGAGAGGGAAAGTAAGAAGAAAATTTGGTCATGA 3147 0.4042 MDPIQSNDIQEYPQTLISEPSDSLMQDANESVFDSMVCDSTSRLITTGFTKKTEEECFMFVNAGGDAFSEAAGGITFLGDTYFDGGNVMRTNERIVEGGDYPFIYQSARLGSFCYRFENIPPGDYVVDLHFVEIININGPKGMRVFNVYIQDEKVLSELDIYAIVGANKPLQLVDSSVSVKDDGVILIRFEGISGSPVVSGICIRRATKASVPQVTSDHIECSYCAAQIEIPSSQMKLMQAKSIAKYESKIKELTMQCDLKAKECYEAWMSLTVTNEQLETVQMELDKVTIKSHTTDQTVEKQAESLRNISNMYELDKKKWADAICSLQEKIKLMKSDYLKLSFEAHECVDSIPELNNMVFAVQELVKQCEDLKVKYNEEMTKRKKLFNEVQEAKGNIRVFCRCRPLNKAEMSAGYNTVVDFDAAKDGCLGILTSGSVKKSFRFDRVYTPKDDQVDVFADASSMVISVLDGYNVCIFAYGQTGTGKTFTMEGTQQNRGVNYRTLEHLFKVSKERSETFSYNISVSVLEVYNEQIRDLLATGQTSKRLEIKQASEGYHHVPGVVEAKIDSINEVWSVLQTGNNARAVGSNNVNEHSSRSHCMLCITVKAKNLLNGDCTKSKLWLVDLAGSERLAKTDAQGERLKEAQNINRSLSALGDVISALAAKSSHIPYRNSKLTHLLQDSLGGDSKTLMFVQISPSDQDLGETLSSLNFATRVRGVELGPVKRQIDTSELQKLKAMLEKARSDCRIKDESMRKLEENLQSLESKAKGKDQIYKNLQEKIKELEGQIELKKAMQSESEKQVSQLSDKLRGKEETCSSLQQKVRELEKRMKEQLQSESASFQQKVWDLEKRLKDQMHESDSESAILKDKIKELERKLKEQEKSSMVMLHQQMKELEDRYREREQQWQQTHSYVDAVRATPDIGKSFMNEECPSEIEAGILRCSDSVNRQTSQGSSLFKGSDSTNKIRSRTREFRSNDENNYVMSSSSLHDRRRVTRKSDPPKIIRSVRPTPRPATGNQAPVSHKRTSTSRDQVPGIRERESKKKIWS 1048
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01352 1048 PANTHER KINESIN-LIKE PROTEIN KLP-3 52 799 IPR027640 GO:0003777|GO:0007018
Viun2g01352 1048 MobiDBLite consensus disorder prediction 950 964 - -
Viun2g01352 1048 Pfam Malectin domain 60 202 IPR021720 -
Viun2g01352 1048 MobiDBLite consensus disorder prediction 990 1004 - -
Viun2g01352 1048 FunFam Kinesin-like protein KIN-14R 53 208 - -
Viun2g01352 1048 Gene3D - 53 209 - -
Viun2g01352 1048 ProSiteProfiles Kinesin motor domain profile. 397 719 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun2g01352 1048 MobiDBLite consensus disorder prediction 950 1048 - -
Viun2g01352 1048 MobiDBLite consensus disorder prediction 1012 1030 - -
Viun2g01352 1048 SUPERFAMILY Tropomyosin 735 914 - -
Viun2g01352 1048 CDD KISc_C_terminal 395 721 - -
Viun2g01352 1048 SMART kinesin_4 395 727 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun2g01352 1048 FunFam kinesin-like protein KIN-14R 346 721 - -
Viun2g01352 1048 Coils Coil 740 852 - -
Viun2g01352 1048 Gene3D - 721 886 - -
Viun2g01352 1048 Gene3D Kinesin motor domain 344 720 IPR036961 -
Viun2g01352 1048 Coils Coil 244 264 - -
Viun2g01352 1048 ProSitePatterns Kinesin motor domain signature. 619 630 IPR019821 GO:0003777|GO:0005524|GO:0007018
Viun2g01352 1048 Pfam Kinesin motor domain 403 718 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun2g01352 1048 MobiDBLite consensus disorder prediction 1031 1048 - -
Viun2g01352 1048 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 397 755 IPR027417 -
Viun2g01352 1048 Coils Coil 857 906 - -
Viun2g01352 1048 Coils Coil 363 397 - -
Viun2g01352 1048 PRINTS Kinesin heavy chain signature 471 492 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun2g01352 1048 PRINTS Kinesin heavy chain signature 589 606 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun2g01352 1048 PRINTS Kinesin heavy chain signature 669 690 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun2g01352 1048 PRINTS Kinesin heavy chain signature 620 638 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01352 Viun-Chr2 24145988 24152248 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01352 369 773 Calmodulin-binding Proteins AT5G65930 40.976 1.75e-85 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01352 K10406 - gmx:100782704 1810.42