Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01332 ATGAAGTATTTTTGTCGTACACTACTTACATTTTGGTCTATACTCATTCATCTTTTCTCTCTCTTTCTATTGAAATCAATATGGTTTACTCCAAACATCACTGTCTTTGCATTAGGAAATGAGACCGATCATTTTGCGTTGCTGAAGTTCAAGGAATCCATATCCAGTGATCCAAATAGAATCTTGTTTTCTTGGAATACATCTACACACTTCTGTAACTGGCATGGAATCACGTGCAATTCTATGCTTCAAAGAGTTACAGAGTTGAATTTGGGAGGATACAAGTTGAAGGGATTCATAACTCCACACATAGGCAATCTATCTCACATGACAACTTTCAACATTGGAAACAACAACTTCTACGGAGAAATCCCCCAAGAATTAGGTAAGTTGTCAAAACTCCAGTACCTTTCTGTTGCAAATAACTCATTCTTGGTAGGAAAATTTCCTTCAAACTTGACTTCTTGCACTGACCTCAAAATCTTGCACCTAAACGGAAACAAATTGACTGGTAAAATACCAGTCGAAATTCTCTCACTTCAGAAGCTTCAACAATTGTACCTTTACAGGAACAATTTATATGGAACAATCCCATCCTTCATGGGAAACCTTTCATCGTTAACCCATCTCTCCCTAGGTTCTAACAACTTTAATAAAAACATCCCACAACAAATTTGTCGTCTCAAACATTTGACATTTCTATCATTAAGTATGAACAAATTGACCGGAGCATTTCCTTCTTGTCTTTATAATATGTCATCTCTTACTATAATCTCAGTGGCCCTAAATCAACTTAACGGCTCTTTGCCATCCAACATGTTCCACACCCTCTCCAATCTCCAAGTACTTCAAATTGGTGTGAATCAAATGTCGGGACCAATCCCATCTTCCATAGCAAATGCATCCACCCTTTCAACAGTTAGTATGCTTGACAACAATTTTTCTGGCCAAGTTCCGAGTTTGGGGAAGCAAATACATCTTCGACGTCTAAGCTTATTTAGAAACAACTTAGGTGACAACTCACTTAATGATTTGGAGTTTTTAAAATCATTGACAAACTGTAGCGAGCTGCAAGTGTTGTCTTTGTCTTACAATAATTTTGGAGGACATTTGCCAAATTCTTTGGGCAATTTATCCACCCAACTCAGTGAATTGTATCTCGGGGGCAATCAAATATCAGGAGATATTCCAGCCACATGTGGAAATCTAATTGGCTTAATTCTTTTTACAATGGAACAAAATCTCATTCATGGAATTATTCCGACAACTTTAGCGAAGCTACAGAAGTTGCAAGTGTTGGACTTAAGCGGAAACAAATTGTCAAGCTTAGGAACCTTCATAGGCAATCTCAGTCAACTGTATTTTTTGAACCTTGCAGAAAACATGTTACAAGGAAGTATTCCTCCCAGTCTAGGAAGTTGCCAAAACTTGCAACATTTATACCTTTCCCATAACAACCTCACGGGAACCATACCATTGCAGGTTTTTAATCTTTCATCTCTAGCTAATATATTTTCATTGTCACAAAACTTGTTGAGTGGTAATATACCAGAAGAAGTGGGCAACCTCAAAAATCTCAACAGGCTATATTTGTCTGAGAATCGTCTCTCTGGTCACATTCCAGAAACTATTGGAGAATGCATAATGTTGGAGGAACTCTATTTGAATGGGAATTCTCTACAAGGAAGCATCCCTTCTTCTTTGGCATCACTCAGAGGTCTTCAAAGTTTAGATCTCTCGCGGAACCTCTTGTCTGGATCAATTCCTAGAGTTCTGCAGAGCATTTCTTCGTTGCAATATTTCAATGTTTCATTTAACATGTTGGATGGAGAGGTACCCACTAAAGGCATATTTAGTAATGCAAGTGGCATAATTGTGACGGGAAATAGTAAGCTTTGTGGAGGTATTTCAAATCTGCATCTACCATTATGTCCTGTCAAAGTCACCAAACAAGCAAAGCATCACTCACTCCGATTAATTGCAATTATAGTAAGTGTAGTTGCTTCTCTTCTCATACTGTTGGTTATTCTAACAATCTACTGGATGAGGAAAAGGAGTAATAAACCATCTTTGGATTCCCCAACAATTGACCAACTGACTAAAGTTTCATACCAAAGCTTATACAATGGAACAAATGGGTTCTCATCTTCAAACTTGATCGGATCTGGAAGCTCTAGCTCTGTATACAAAGGAACTCTTGAGCAAGAAGACAAGATTGTTGCCGTAAAGGTCCTAAACCTTCAAAAGAAAGGAGCTGACAAAAGTTTCATTGTTGAATGCAATGCACTTAAAAATATTAGACACCGAAATCTGGTTCCGACTTTGACTTGTTGTTCTAGCACAGATTACAAAGGTCAAGACTTTAAAGCTATAATTTTTGAGTATATGACAAATGGAAGCCTAGAACAGTGGATTCATCGTGGGACACCAAGTGCACCACACATGAGAAGATTGAGCCTTCATCAACGACTAAACATCACAATTGATGTTGCTTCTGCATTGCATTATCTTCACCATGAGTGTGAACAACTGATCATTCACTGTGATATAAAACCAAGCAATGTTCTTCTTAATGATAGCATGGTTGCGCATGTGGGTGATTTTGGTATAGCAAGACTCTTATCAACTTTCAATCACACCACTTCTGGGCAAACAAGTACAAATGGAATAAAGGGTACAATTGGTTATGCTCCTCCGGAGTATGGAGAGAGGTACAAGGTGTCAACTTACGGTGACGTGTATAGTTTTGGAATTCTTATATTGGAAATGCTGACCGGAAGAAGACCTACAGATGAAATGTTTAAAGATGGTCAAAATCTTCGTAACTTTGTTGCAATTTCATTTCCTAACAATCTTTTGCAGATTTTGGACCCAAGAATCATTTCAGAGTATGAAGCAACTGCAGTGGAGGGAAACTGTTGTAATCTTAATGCAGAGGCTGAAAAGTGTGTAGTTTCGCTTTTCAGAATTGGACTTGCTTGCTCTGTGGAATCACCCAAAGAAAGAATGAAGTTGGTTGACGTTATCAGAGAACTTAATCAAATCACCAAGGTTTCTTCTTTACTGGAGATGACAATCGAGGATTAA 3087 0.38 MKYFCRTLLTFWSILIHLFSLFLLKSIWFTPNITVFALGNETDHFALLKFKESISSDPNRILFSWNTSTHFCNWHGITCNSMLQRVTELNLGGYKLKGFITPHIGNLSHMTTFNIGNNNFYGEIPQELGKLSKLQYLSVANNSFLVGKFPSNLTSCTDLKILHLNGNKLTGKIPVEILSLQKLQQLYLYRNNLYGTIPSFMGNLSSLTHLSLGSNNFNKNIPQQICRLKHLTFLSLSMNKLTGAFPSCLYNMSSLTIISVALNQLNGSLPSNMFHTLSNLQVLQIGVNQMSGPIPSSIANASTLSTVSMLDNNFSGQVPSLGKQIHLRRLSLFRNNLGDNSLNDLEFLKSLTNCSELQVLSLSYNNFGGHLPNSLGNLSTQLSELYLGGNQISGDIPATCGNLIGLILFTMEQNLIHGIIPTTLAKLQKLQVLDLSGNKLSSLGTFIGNLSQLYFLNLAENMLQGSIPPSLGSCQNLQHLYLSHNNLTGTIPLQVFNLSSLANIFSLSQNLLSGNIPEEVGNLKNLNRLYLSENRLSGHIPETIGECIMLEELYLNGNSLQGSIPSSLASLRGLQSLDLSRNLLSGSIPRVLQSISSLQYFNVSFNMLDGEVPTKGIFSNASGIIVTGNSKLCGGISNLHLPLCPVKVTKQAKHHSLRLIAIIVSVVASLLILLVILTIYWMRKRSNKPSLDSPTIDQLTKVSYQSLYNGTNGFSSSNLIGSGSSSSVYKGTLEQEDKIVAVKVLNLQKKGADKSFIVECNALKNIRHRNLVPTLTCCSSTDYKGQDFKAIIFEYMTNGSLEQWIHRGTPSAPHMRRLSLHQRLNITIDVASALHYLHHECEQLIIHCDIKPSNVLLNDSMVAHVGDFGIARLLSTFNHTTSGQTSTNGIKGTIGYAPPEYGERYKVSTYGDVYSFGILILEMLTGRRPTDEMFKDGQNLRNFVAISFPNNLLQILDPRIISEYEATAVEGNCCNLNAEAEKCVVSLFRIGLACSVESPKERMKLVDVIRELNQITKVSSLLEMTIED 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01332 1028 Gene3D Phosphorylase Kinase; domain 1 695 795 - -
Viun2g01332 1028 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 79 346 - -
Viun2g01332 1028 SUPERFAMILY L domain-like 380 634 - -
Viun2g01332 1028 SUPERFAMILY L domain-like 40 337 - -
Viun2g01332 1028 ProSiteProfiles Leucine-rich repeat profile. 476 497 IPR001611 GO:0005515
Viun2g01332 1028 Pfam Leucine Rich Repeat 357 378 IPR001611 GO:0005515
Viun2g01332 1028 Pfam Protein kinase domain 716 937 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g01332 1028 ProSiteProfiles Protein kinase domain profile. 714 1022 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g01332 1028 SMART LRR_sd22_2 379 394 - -
Viun2g01332 1028 SMART LRR_sd22_2 571 597 - -
Viun2g01332 1028 SMART LRR_sd22_2 523 546 - -
Viun2g01332 1028 SMART LRR_sd22_2 427 452 - -
Viun2g01332 1028 SMART LRR_sd22_2 228 254 - -
Viun2g01332 1028 SMART LRR_sd22_2 180 206 - -
Viun2g01332 1028 SMART LRR_sd22_2 474 495 - -
Viun2g01332 1028 SMART LRR_typ_2 523 547 IPR003591 -
Viun2g01332 1028 SMART LRR_typ_2 475 498 IPR003591 -
Viun2g01332 1028 SMART LRR_typ_2 571 594 IPR003591 -
Viun2g01332 1028 SMART LRR_typ_2 204 228 IPR003591 -
Viun2g01332 1028 SMART LRR_typ_2 252 276 IPR003591 -
Viun2g01332 1028 SMART LRR_typ_2 354 378 IPR003591 -
Viun2g01332 1028 SMART LRR_typ_2 427 448 IPR003591 -
Viun2g01332 1028 SMART LRR_typ_2 180 202 IPR003591 -
Viun2g01332 1028 SMART LRR_typ_2 450 474 IPR003591 -
Viun2g01332 1028 Gene3D Transferase(Phosphotransferase) domain 1 796 1025 - -
Viun2g01332 1028 Pfam Leucine Rich repeat 473 489 IPR001611 GO:0005515
Viun2g01332 1028 FunFam LRR receptor-like serine/threonine-protein kinase EFR 685 795 - -
Viun2g01332 1028 FunFam LRR receptor-like serine/threonine-protein kinase EFR 347 650 - -
Viun2g01332 1028 SUPERFAMILY Protein kinase-like (PK-like) 687 1012 IPR011009 -
Viun2g01332 1028 ProSiteProfiles Leucine-rich repeat profile. 429 450 IPR001611 GO:0005515
Viun2g01332 1028 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 796 1024 - -
Viun2g01332 1028 SMART serkin_6 714 1016 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g01332 1028 ProSitePatterns Protein kinases ATP-binding region signature. 720 743 IPR017441 GO:0005524
Viun2g01332 1028 ProSitePatterns Serine/Threonine protein kinases active-site signature. 845 857 IPR008271 GO:0004672|GO:0006468
Viun2g01332 1028 PRINTS Leucine-rich repeat signature 430 443 - -
Viun2g01332 1028 PRINTS Leucine-rich repeat signature 571 584 - -
Viun2g01332 1028 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 263 1012 - -
Viun2g01332 1028 Pfam Leucine rich repeat 182 241 IPR001611 GO:0005515
Viun2g01332 1028 Pfam Leucine rich repeat 381 440 IPR001611 GO:0005515
Viun2g01332 1028 Pfam Leucine rich repeat 550 608 IPR001611 GO:0005515
Viun2g01332 1028 Gene3D Ribonuclease Inhibitor 39 324 IPR032675 -
Viun2g01332 1028 Gene3D Ribonuclease Inhibitor 325 653 IPR032675 -
Viun2g01332 1028 Pfam Leucine rich repeat N-terminal domain 41 80 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01332 Viun-Chr2 23942558 23962299 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01332 40 1017 Receptor kinase-like Gene Family AT3G47570 44.949 0.0 816
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Viun2g01332 Pkinase 1.8e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01332 - - gmx:100801459 1367.83