Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01322 ATGGCTCTTCCTGGTTCTCTGCAGTTGTCCCATGGATTGGGACTTTGCAGGAACCTGGGCTGCAATAAACATTCGAGGGCAACGGGACATGGCAAGTTACATTTATTTAGGGCAGGTCTTTCGTGTTCTATTTCGTTCATGAGACAGGAGTGTGGGGGTTTTCAACACCTTCGTCATATAAACAAGCCAACACATACATTATCGGGCAAGGGCCGAACTTTTAAGTGTCATTGTCTTTTAGTGCCAGGCCAACCAAATGATCTTCCTGCTGTTAAGGCGGCTGCTACTGTGTTGGCTAGGTCTAGTAATTTGTTACAAAATAGTCCTATCATAGTAAAGTTGATTCCTGCAATTGGCGTTATCATTTTTGCTATATGGGGTGTTGGTCCATTATTGTTCCAGACAAGGAAAATACTCTTCCAGAGGAGTGATAATAGTTGGAAGAAAAGTACCACTCACTATATAGTAACTTCTTACCTTCGGCCATTACTGTTATGGACTGGAGCAATACTTATTTGCAGAGCATTGGAGCCATTAATTCTACCTTCAGAACCTGGTCAAGTTGTTAAGGACCGGCTTCTGAATTTTGTGAGATCATTGTCAACGGTTCTGGCCTTTGCCTATTGTTTGTCAAGTGTAATTCAACAATCACAGAAATTCTTTGCGGAGGCTACTGATGCAAGTGAGACGAGAAATATGGGATTCCAATTTGCTGGAAAAGCTGTTTATTCTGCAGTATGGATAGCAGCCTTTTCGTTGTTCATGGAATTATTAGGCTTCTCTACCCAGAAATGGGTTACTGCAGGAGGTCTTGGGACAGTTTTGCTGACCCTTGCTGGTCGTGAGATATTTACAAACTTCCTTTCAAGTGTGATGATTCATGCAACTCGGCCTTTTGTGGTTAACGAATGGATTCAAACAAAGATTGAAGGATATGAGGTTTCTGGTACTGTCGAGCATGTGGGCTGGTGGTCACCAACAATTATTAGAGGTGAAGATCGTGAAGCTGTTCACATTCCAAACCACAAATTTACAGTGAATGTTGTGCGAAACCTTAGTCAAAAAACACATTGGCGAATCAAAACCCATCTAGCCATTAGTCATTTGGATGTAAATAAGATTAATAACATTGTTGCTGACATGCGGAAGGTATTGGCCAAAAATCCTCAAGTTGAGCAACAGAGACTGCACAGGAGAGTGTTTTTGGACAACATAAATCCTGAAAATCAGGCTCTTTTGATTCTGGTGTCTTGTTTTGTTAAGACCTCACATTTTGAAGAATATCTGTGTGTTAAGGAAGCAATACTGCTGGATCTTCTTAGAGTTATAGGCCATCACCGAGCCAGACTTGCAACACCGGTCCGTACCCTGCAGAAAGTATACAGAGATGCTGACTTGGATAATATACCGTTTGCAGATTCCACATTTGGTGGTGGTCCTGTCACAGTACCTAACCGTCCATTATTAGTGATTGAACCATCTTACAAAATCAATGGAGATGATAAGATGAAAAGTCGTTCAGCACGACCAGTTGTTGATCAAGATAATAAGACATCTAACTCTGACGCAAATGGAAACTCTAAGACACCTGTGACATCTAATTCTGACACAAATGGAAAGACAGTTGTGACACCCAAACCTGATCCAGAAGTGGGTGAAAACAAGCCACTGAAATTAGATTCAAACAAGGAAAACGTGGAGGTTCCAGAATCTTCTAAATCTAAAGTATCTGGTTTGGCAGTAGAAAATTCAGTCCAGAAGGACATAGAATCCAAGCAATCCAAGGGTCAGACCACTAAGAACATAAAGCCAAATATTGAGTCTGAGAATGCTGTGCCCTCCTCATCTAACAGTGCTGACAAAACTGGTGGAGTTAATACAAATATAGCATCAAAACCGCAAGGGGAAAAGAAACCTGCTGCACAGCCTCATGCATCCAGGAATGTTTTAGAAGAAAATATAGTACTAGGTGTTGCATTGGAGGGATCAAAGAGGACTCTTCCCATTGATGAGGAGATTGACAATGTGACATCTCGAGAGTCAAAGGAAGTGGCTGCATTCCAGGGTGGAAATGGACCTCCAAAGGCTCTAGATGGAAATGACTAG 2106 0.4179 MALPGSLQLSHGLGLCRNLGCNKHSRATGHGKLHLFRAGLSCSISFMRQECGGFQHLRHINKPTHTLSGKGRTFKCHCLLVPGQPNDLPAVKAAATVLARSSNLLQNSPIIVKLIPAIGVIIFAIWGVGPLLFQTRKILFQRSDNSWKKSTTHYIVTSYLRPLLLWTGAILICRALEPLILPSEPGQVVKDRLLNFVRSLSTVLAFAYCLSSVIQQSQKFFAEATDASETRNMGFQFAGKAVYSAVWIAAFSLFMELLGFSTQKWVTAGGLGTVLLTLAGREIFTNFLSSVMIHATRPFVVNEWIQTKIEGYEVSGTVEHVGWWSPTIIRGEDREAVHIPNHKFTVNVVRNLSQKTHWRIKTHLAISHLDVNKINNIVADMRKVLAKNPQVEQQRLHRRVFLDNINPENQALLILVSCFVKTSHFEEYLCVKEAILLDLLRVIGHHRARLATPVRTLQKVYRDADLDNIPFADSTFGGGPVTVPNRPLLVIEPSYKINGDDKMKSRSARPVVDQDNKTSNSDANGNSKTPVTSNSDTNGKTVVTPKPDPEVGENKPLKLDSNKENVEVPESSKSKVSGLAVENSVQKDIESKQSKGQTTKNIKPNIESENAVPSSSNSADKTGGVNTNIASKPQGEKKPAAQPHASRNVLEENIVLGVALEGSKRTLPIDEEIDNVTSRESKEVAAFQGGNGPPKALDGND 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01322 701 MobiDBLite consensus disorder prediction 512 542 - -
Viun2g01322 701 MobiDBLite consensus disorder prediction 499 649 - -
Viun2g01322 701 Gene3D - 299 354 IPR023408 -
Viun2g01322 701 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 684 IPR045042 -
Viun2g01322 701 MobiDBLite consensus disorder prediction 576 633 - -
Viun2g01322 701 Pfam Mechanosensitive ion channel 240 446 IPR006685 GO:0016020|GO:0055085
Viun2g01322 701 Gene3D - 195 297 - -
Viun2g01322 701 MobiDBLite consensus disorder prediction 551 570 - -
Viun2g01322 701 MobiDBLite consensus disorder prediction 670 701 - -
Viun2g01322 701 SUPERFAMILY Sm-like ribonucleoproteins 283 353 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01322 Viun-Chr2 23822390 23830353 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01322 9 693 Mechanosensitive Ion Channel Family AT5G10490 58.466 0.0 756
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01322 K22047 - gmx:100796304 1202.58