Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01303 ATGGCTCATAACTCAGAGAACAGTAGCACCTTCTTTGATCATGATTTTCAATGTGATGGAGCAGATGATTTTAGAATCTTGCATTCCTGGAACCACCGGAACCTTGACTCTGGATATGAAGATGGTGGTGGATCGGAGGAATTAGCATGTACTCTGCCCCAGAGTGAGGAAACTGTAAGGGCTATGGTGGCGAGAGAGAGGGAGCATTTTCCGAGGGTCGATTACTTGCAGAGGCTGAGGACTGGGAAGTTGGAATTGGGTGTTAGGAGGGATGCACTTGATTGGATTTGGAAGGCTCATGCTTATTTTGGCCTTGGACCCTTGAGTTTTTGTTTGGCTGTGAACTACTTGGATCGCTTCCTATCGGTTTTTGACTTACCGAAAGGTGTAAGTTGGACTGTGCAATTGTTAGCTGTAGCGTGCTTGTCAATTGCAGCTAAAATGGACGAGATCCGAGTGCCTCAATCTGTAGATTTACAGGTTGGGGAACCAAAGTTTGTGTTTGAAGCTAAAACCATTCAAAAAATGGAACTACTGGTATTAAGCAAGTTGAGATGGAAAATGTGTGCATTAACTCCTTATTCCTTCATAGAATACTTCCTTAGCAAGCTCACTTGTGAGAAGCACCCAACAAAATCATCCATTGCAATATCAGTGCAGCTCATCCTCCGTATAATCAGTGGTATCGACTTCTTGGAATTCCGGCCTTCTGAAATTGCTGCTGCGGTGGCAATTTCTGTTTTAGGAGAATCACAGGCGAAAGATATCGATAAGTCCATTGCCGAGCTCTTTATAGTAGAGAAGGATAGAGTTCTAAAGTGTGTTGAATTGATAAGAGATTTGTCCTTGAACAGTGTTGCTGGCAGTGTAGGAACCAAGGTGCCACAAAGTCCTATGGGGGTGATGGATGCTGCTGGATGCTTAAGTTACAAGAGTGATGAATTAACAGTTGGATCATGTTTAAATTCTTCAGAAGATAGCCCAAGTCCAAACACTAAGAGTAGTAAAGCAGAAGGACCTTGTAATGAACCTCCGAGTGATGAAATGTGA 1050 0.4324 MAHNSENSSTFFDHDFQCDGADDFRILHSWNHRNLDSGYEDGGGSEELACTLPQSEETVRAMVAREREHFPRVDYLQRLRTGKLELGVRRDALDWIWKAHAYFGLGPLSFCLAVNYLDRFLSVFDLPKGVSWTVQLLAVACLSIAAKMDEIRVPQSVDLQVGEPKFVFEAKTIQKMELLVLSKLRWKMCALTPYSFIEYFLSKLTCEKHPTKSSIAISVQLILRIISGIDFLEFRPSEIAAAVAISVLGESQAKDIDKSIAELFIVEKDRVLKCVELIRDLSLNSVAGSVGTKVPQSPMGVMDAAGCLSYKSDELTVGSCLNSSEDSPSPNTKSSKAEGPCNEPPSDEM 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01303 349 Gene3D - 61 277 - -
Viun2g01303 349 FunFam D6-type cyclin 185 276 - -
Viun2g01303 349 SUPERFAMILY Cyclin-like 50 188 IPR036915 -
Viun2g01303 349 SMART cyclin_7 94 182 IPR013763 -
Viun2g01303 349 Gene3D - 72 189 - -
Viun2g01303 349 Pfam Cyclin, C-terminal domain 192 286 IPR004367 -
Viun2g01303 349 MobiDBLite consensus disorder prediction 319 349 - -
Viun2g01303 349 MobiDBLite consensus disorder prediction 319 339 - -
Viun2g01303 349 Pfam Cyclin, N-terminal domain 60 189 IPR006671 -
Viun2g01303 349 PANTHER CYCLINS 55 280 IPR039361 -
Viun2g01303 349 CDD CYCLIN_AtCycD-like_rpt2 192 278 - -
Viun2g01303 349 SMART Cyclin_C_2 191 310 IPR004367 -
Viun2g01303 349 FunFam D2/4-type cyclin 72 184 - -
Viun2g01303 349 ProSitePatterns Cyclins signature. 89 120 IPR006671 -
Viun2g01303 349 CDD CYCLIN_AtCycD-like_rpt1 88 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01303 Viun-Chr2 23645402 23647765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01303 54 259 Core Cell Cycle Gene Families AT5G65420 59.135 4.37e-85 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01303 K18810 - gmx:100794010 478.789