Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01290 ATGTTCAGATCAGCTCAACCCGCTTCAAAACCTTCCAAATCCACCATGAAATTCCTCTGCAGTTACGGCGGCAGAATCCTCCCTCGTTACCCTGACGGCAAGCTCCGCTACCACGGAGGCCACACCCGCGTCCTCGCCGTCGACCGCTCTATTACCTTCTCCGAGCTGCTGCTTAAGCTGGAAGAGCTCTGCGGTGCCTCCGTGAGGCACCTCCGCTGCCAATTACCCTCCGAAGACCTCGACGCTCTTATCTCCATCACCTCCGACGAAGATCTTGCCAATCTCATCGAGGAATACGACCGCGTTTCATCGCTCAAGATCAGAGCCTTCCTCTCGCCGCCCACGCCGTCCAGATCTACGAACAACGCTTCCAGTCCTCCTTCGAAATCAGCTTCATTATCTTCCTCCTCAGCGTCATCGTCGTCGTCTTCTTCGTCGTATTGCAGTCCTACTGACAAATCTGGTCGGAGTTACAGAACCTCGGCCCCGGTGGTCGACCGTTGCGTCCATCAGATGTCGCCGGCTCCTGCGCACCGGGCCGCTGTGGATAAATCGAAATCCCCCCGGAGGAATATTCCTCTCCCGCGCTACGGTTACCACGGGAGCGGTGGCCAGGTTTACCTGATCCACCACGGGAACCACTGGCAATAA 651 0.5714 MFRSAQPASKPSKSTMKFLCSYGGRILPRYPDGKLRYHGGHTRVLAVDRSITFSELLLKLEELCGASVRHLRCQLPSEDLDALISITSDEDLANLIEEYDRVSSLKIRAFLSPPTPSRSTNNASSPPSKSASLSSSSASSSSSSSSYCSPTDKSGRSYRTSAPVVDRCVHQMSPAPAHRAAVDKSKSPRRNIPLPRYGYHGSGGQVYLIHHGNHWQ 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01290 216 SUPERFAMILY CAD & PB1 domains 32 121 - -
Viun2g01290 216 MobiDBLite consensus disorder prediction 173 197 - -
Viun2g01290 216 MobiDBLite consensus disorder prediction 113 158 - -
Viun2g01290 216 MobiDBLite consensus disorder prediction 112 160 - -
Viun2g01290 216 PANTHER OS05G0427100 PROTEIN-RELATED 10 177 - -
Viun2g01290 216 SMART PB1_new 30 114 IPR000270 GO:0005515
Viun2g01290 216 Pfam PB1 domain 32 113 IPR000270 GO:0005515
Viun2g01290 216 CDD PB1_UP2 19 111 - -
Viun2g01290 216 Gene3D - 34 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01290 Viun-Chr2 23459659 23462444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01290 16 111 MAP Kinase Kinase Kinase AT5G57610 51.485 1.03e-26 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01290 - - gmx:100810685 304.679