Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01277 ATGAGTGCCATTGAACCTACATTGAGTTTTTCTCAGCACCGGAAAATGGCACGGATCTTCCTTACCACTCTTTCTCTGCTGCTCCTGCTCCTTGCTCCTTCCGTGGCTGGTCAAGCATACACACCGGTATCTTCTTATGAATCTCAGGTTCCATTTCTGGGCCGCCATGAAGATTCCAACACTAAACTAACCGGTGATTCACCCGAGGAAAGAAAAAAGTTCGATGATCGAACACGCTACACAATACCTCAAAATGCTTACCACTCTCCCAACAAACTCATTGAAGGATACTACGACAAAACTTGCCCCGATGCAGAAAAAATGGTCGCCACAGGGTTCCGCCAGATCGTTAGGCTCAACCCAGGCGCAATCGGTCACATCATTCGCCTTCAGTTCCATGATTGCTTCGTCAATGGATGCGATGGATCGATTTTGTTAGATTTTACACCATCGGGTGACATGGTTGAGAAAAGTTCAATGTTCAATGGTCTGCTCCTGAAAGGGTCAGACATAATTGATGACATAAAGACAAGGCTGGAGAAGAAGTGTCCTGGAATCGTGTCATGTGCCGACGTATTGGCATTTACCACGAACGAAGCAATGACAATGGCGGGTTTACCTGCTCGGAGGCCCCTTGGTGGACGCAGAGACTCCATTGTTTCCCTTGCAAGCATTGTGGAAGCCGACAATCTTCCTATGTCAGATTGGAACATCGACCAAATGATGGAACTGTTTGGCAGGAAAGGGTTCAACATAGAAGAAATGGTGGTGATGATTGGTGCACATTCTGTCGGCATTGCTCATTGCGACTTCTTCATGCAGAGGGCCTTAAACTTCAATGGCACTGGAATCCCTGACCCTACCCTGGGTGTGGAGGCGATTGAGGAAATCAGAAAAGCATGTCCTGACGCTGGCACGGCCCTGTTTAGGAACCCCCCTGTGAACTTCGATGCCACACCAACTGTTCTTGATAACCTCTTCTTCAAGGACATGGTGGAGAAAAGGAGAAGTTTGCTCATCACCGATTCTCATCTGCTTGAAGATCCCAGAACTAGACCAATCGTCGAACAGATGGCAGGTGACCCTACCTTGTTCCCCAGAAGGTTTGCTGAGGTCATGATCAAGCTCACTTCTTTGAATGTGCTCACAGGGACTGAAGGGGAGGTCAGAAAGATCTGTAGGTCCACCAATTAA 1194 0.4791 MSAIEPTLSFSQHRKMARIFLTTLSLLLLLLAPSVAGQAYTPVSSYESQVPFLGRHEDSNTKLTGDSPEERKKFDDRTRYTIPQNAYHSPNKLIEGYYDKTCPDAEKMVATGFRQIVRLNPGAIGHIIRLQFHDCFVNGCDGSILLDFTPSGDMVEKSSMFNGLLLKGSDIIDDIKTRLEKKCPGIVSCADVLAFTTNEAMTMAGLPARRPLGGRRDSIVSLASIVEADNLPMSDWNIDQMMELFGRKGFNIEEMVVMIGAHSVGIAHCDFFMQRALNFNGTGIPDPTLGVEAIEEIRKACPDAGTALFRNPPVNFDATPTVLDNLFFKDMVEKRRSLLITDSHLLEDPRTRPIVEQMAGDPTLFPRRFAEVMIKLTSLNVLTGTEGEVRKICRSTN 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01277 397 ProSiteProfiles Plant heme peroxidase family profile. 92 397 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun2g01277 397 PANTHER PEROXIDASE 25-RELATED 64 385 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun2g01277 397 FunFam Peroxidase 232 376 - -
Viun2g01277 397 SUPERFAMILY Heme-dependent peroxidases 94 397 IPR010255 GO:0004601|GO:0006979|GO:0020037
Viun2g01277 397 PRINTS Haem peroxidase superfamily signature 205 217 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun2g01277 397 PRINTS Haem peroxidase superfamily signature 124 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun2g01277 397 PRINTS Haem peroxidase superfamily signature 254 269 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun2g01277 397 PRINTS Haem peroxidase superfamily signature 187 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun2g01277 397 PRINTS Haem peroxidase superfamily signature 316 331 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun2g01277 397 ProSitePatterns Peroxidases proximal heme-ligand signature. 254 264 IPR019793 -
Viun2g01277 397 Pfam Peroxidase 114 360 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun2g01277 397 CDD secretory_peroxidase 96 396 IPR033905 GO:0004601|GO:0042744
Viun2g01277 397 Gene3D Peroxidase, domain 2 232 376 - -
Viun2g01277 397 Gene3D - 96 397 - -
Viun2g01277 397 PRINTS Plant peroxidase signature 253 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun2g01277 397 PRINTS Plant peroxidase signature 205 220 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun2g01277 397 PRINTS Plant peroxidase signature 126 146 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun2g01277 397 PRINTS Plant peroxidase signature 331 348 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun2g01277 397 PRINTS Plant peroxidase signature 102 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun2g01277 397 PRINTS Plant peroxidase signature 186 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun2g01277 397 PRINTS Plant peroxidase signature 167 180 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun2g01277 397 PRINTS Plant peroxidase signature 371 384 IPR000823 GO:0004601|GO:0006979|GO:0020037
Viun2g01277 397 FunFam Peroxidase 96 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01277 Viun-Chr2 23329281 23331044 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01277 97 397 Peroxidase AT3G03670 38.944 2.26e-68 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01277 K00430 - gmx:100802856 483.026