Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01241 ATGGCTAACGAATCCTCTTCAAATGGGACGCCTATGTCGGATTCTGTTACGGCTTCAGCTCCGTCACAGTCCTCGTCGCAGCAGTCATCGGACGACGCAGAGTCTCCGCCACCCTCGGAACCGCCGCCGCTACAGTCTTCACCGTCATCGCCTTTACCATCGCCGTCGATATCACCACCACCACCACCCCCAGAAATGTCTTCTCCTCCACCTACCGTATCTCCGCCGGAATATTCTCCTCCGCCGGCACCGGAGAATTCCCCTCCCCCATCAACTCCGGTTGATTCATCGCCACCACCAACTCCTTCTACTTCTCCACCACCAACCGCTTCTACTTCTCCACCACCAACCCCTTCTACTTCTCCACCCCCTTCTACTTCTCCACCCCCGTCTACTTCTCCACCACCAACCTCTTCTACTTCTCCACCACCTACCCCTTCTCCGTCGCCACCTCCGCCTGATCAATCTTCTCCCCCGCCAACACGTTCTCCGCCTCCTCCGTCACCAAGACGTTCAGCTCCACCACCATCTCTCACACCGCCGCCACGTTCCCAACCGTCACCATCACCGCCACCATCACCATCACCGCCACCTCCACAACCGTCAAAATCACCGCCACCTCCACCCCCACAAAATTCACCTTCATCACCGCAACCTTACGTTGCTCCTCCACAGTTCCTTTCGCCTCCAACTCCAACCGCAACTCCACCTTCATCGGCTTTTCGTATTACCTTGGGTAGGGCGGATCTGCAGACACCTGCAGCGTCAGCTCCCCCTTCACAACTGCGACCATCACCACCAGAATTACCACCGCGAATATTACCAACATTACCTCCGATTTTCCATTTGTCTGCTCCCCCGAAGAGCAGCCTTACGCCGCCGCCGGCGGTGACTCCAAGCCCCTCCGGCAATAATACTACAGGACAAATTGTTGGTCTTACTCTAGCCGGGGTTTTCGTCATCGCCTTTATTGTTCTGGTTATTTTCTTTTTATTAAGGAATAAGCGAGAGAACAACCATGTCGTGCCCTCCCCTGGAACATCTAATTTAAGAGGAGCAGGTACATCAGGAGATGTGCTTTACTATGTAGAGGAGCCTGGTTTTGGGAGTGGAGCACAACAAGGTGGCATGCATATAAGAACTCCTTCAGATCCTGCGTTTAGCGGTGGCCAGTTAGTTTTTACCTACGAAAAGATTGCGGAGATCACTAACGGGTTTTCCCGCGAAAACATAATAGGGGAGGGGGGATTTGGGTATGTTTACAAGGCTTCCATGCCTGATGGTAGAGTGGGGGCACTTAAGACGTTGAAGGCTGGTAGTGGCCAAGGAGAAAGGGAGTTCAGGGCTGAGGTTGACACTATCAGCAGAATCCATCATCGACATTTGGTTTCACTTATTGGTTATTGCATAGCAGAACAGCAAAGAGCGCTTATCTATGAGTTCGTTCCTAATGGGAATCTCAATCAGCACTTGCAGGGAACTGAATTTCCAGTTTTGGATTGGTCCAAGAGGATGAAGATAGCAATTGGTGCTGCAAGGGGCCTGACATATCTTCATGATGGATGCAACCCAAAGATTATTCACAGAGATATTAAATCGGCAAACATTCTTTTGGATAATGCTTACGAGGCACAGGTTGCAGACTTTGGACTTGCAAAGCTAACAGATGATACTAATACTCATGTATCAACTAGGGTGATGGGGACCTTTGGGTACATGGCTCCAGAGTATGCAACAAGTGGAAAATTAACGGATAGATCAGATGTTTTCTCTTTTGGAGTTGTCCTCCTTGAGCTTATAAGTGGAAGGAAACCTGTTGATCCAACGCAGCCCTTGGGAGAGGAGAGTTTGGTTGAGTGGGCTCGTCCACTTCTCCTTCGTACACTTGAGACAGGAGAATTTGGTGAACTAGTAGACCCTAAGCTTCAACAACAATACATTGAAAAAGAAATGTTGAAAATGACTGAGGCAGCAGCAGCATGTGTTCGCCATTCTGCTCAAAAGCGACCTCGTATGGTTCAGGTGCTAAGATCCTTAGACAACGGTGATCAACTATATGATCTTTCAAATGGGGTGAAATATGGTCAGAGCACTGTTTATCATTCTGGTCAGTATAATGAAGACATTGCAAGATTCAGAAAGATGGTTAATGGAAGCTTTGATGATTCCGATTTTGATAATCTCAGCTCGGAATTCCGTTCAACTGCTTCAAAAGAAATGGTTGAACACAACTCTGCAAGGATGTCACCTAGTGCATCAAATAGTGATTCAGAATTTAAAGATCTCCACCACCAAAGGAGCCATACCCAGAACATGTCTTAA 2322 0.4892 MANESSSNGTPMSDSVTASAPSQSSSQQSSDDAESPPPSEPPPLQSSPSSPLPSPSISPPPPPPEMSSPPPTVSPPEYSPPPAPENSPPPSTPVDSSPPPTPSTSPPPTASTSPPPTPSTSPPPSTSPPPSTSPPPTSSTSPPPTPSPSPPPPDQSSPPPTRSPPPPSPRRSAPPPSLTPPPRSQPSPSPPPSPSPPPPQPSKSPPPPPPQNSPSSPQPYVAPPQFLSPPTPTATPPSSAFRITLGRADLQTPAASAPPSQLRPSPPELPPRILPTLPPIFHLSAPPKSSLTPPPAVTPSPSGNNTTGQIVGLTLAGVFVIAFIVLVIFFLLRNKRENNHVVPSPGTSNLRGAGTSGDVLYYVEEPGFGSGAQQGGMHIRTPSDPAFSGGQLVFTYEKIAEITNGFSRENIIGEGGFGYVYKASMPDGRVGALKTLKAGSGQGEREFRAEVDTISRIHHRHLVSLIGYCIAEQQRALIYEFVPNGNLNQHLQGTEFPVLDWSKRMKIAIGAARGLTYLHDGCNPKIIHRDIKSANILLDNAYEAQVADFGLAKLTDDTNTHVSTRVMGTFGYMAPEYATSGKLTDRSDVFSFGVVLLELISGRKPVDPTQPLGEESLVEWARPLLLRTLETGEFGELVDPKLQQQYIEKEMLKMTEAAAACVRHSAQKRPRMVQVLRSLDNGDQLYDLSNGVKYGQSTVYHSGQYNEDIARFRKMVNGSFDDSDFDNLSSEFRSTASKEMVEHNSARMSPSASNSDSEFKDLHHQRSHTQNMS 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01241 773 Pfam Protein tyrosine and serine/threonine kinase 409 679 IPR001245 GO:0004672|GO:0006468
Viun2g01241 773 Gene3D Transferase(Phosphotransferase) domain 1 482 694 - -
Viun2g01241 773 MobiDBLite consensus disorder prediction 35 236 - -
Viun2g01241 773 MobiDBLite consensus disorder prediction 252 303 - -
Viun2g01241 773 SUPERFAMILY Protein kinase-like (PK-like) 382 679 IPR011009 -
Viun2g01241 773 PRINTS Proline rich extensin signature 32 53 - -
Viun2g01241 773 PRINTS Proline rich extensin signature 55 71 - -
Viun2g01241 773 PRINTS Proline rich extensin signature 91 116 - -
Viun2g01241 773 PRINTS Proline rich extensin signature 72 89 - -
Viun2g01241 773 MobiDBLite consensus disorder prediction 736 756 - -
Viun2g01241 773 SMART serkin_6 406 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g01241 773 MobiDBLite consensus disorder prediction 259 300 - -
Viun2g01241 773 ProSiteProfiles Protein kinase domain profile. 406 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun2g01241 773 MobiDBLite consensus disorder prediction 1 34 - -
Viun2g01241 773 MobiDBLite consensus disorder prediction 736 773 - -
Viun2g01241 773 MobiDBLite consensus disorder prediction 1 240 - -
Viun2g01241 773 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 380 481 - -
Viun2g01241 773 ProSitePatterns Serine/Threonine protein kinases active-site signature. 526 538 IPR008271 GO:0004672|GO:0006468
Viun2g01241 773 CDD STKc_IRAK 412 681 - -
Viun2g01241 773 Gene3D Phosphorylase Kinase; domain 1 373 481 - -
Viun2g01241 773 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 319 734 IPR047117 -
Viun2g01241 773 FunFam proline-rich receptor-like protein kinase PERK8 482 694 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01241 Viun-Chr2 22994511 22999833 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01241 310 621 Trihelix Transcription Factor Family AT1G26150 54.232 2.85e-117 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Viun2g01241 PK_Tyr_Ser-Thr 2.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01241 - - vun:114173221 1050.43