Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01209 ATGGATCTAGAAGGTGGAACTCGTCGATACTCTGCTAAGAGAGAGTCGTGGAGAACAGTTCTGACTCTAGCGTACCAGAGTCTGGGTGTAGTGTACGGTGATTTGAGCATTTCGCCGTTGTACGTTTTCAGAAGCACGTTTGCGGAGGACATTAAGCACACGGAGAGCAACGACGAGGTTTTCGGCGTTTTGTCGCTGGTGTTCTGGACTATAACGCTGGTTCCTTTGGTGAAGTACGTGTTTGTTGTGCTGAAAGCTGATGATAACGGCGAGGGAGGCACGTTCGCGTTGTACTCGTTACTGTGCCGCCACGCGCGGGTGAGTTCGCTGCCGAATTGCCAGGTGGCGGACGAGGAGTTGTCGGAGTACAAGAAGGATTCGCGCGGCGCGGCTCCGGAGAGGAGCTTCGCGTTGCGGCTCAAAAGCACGTTTGAGAAGCACAAGGTTCTGCAGAGGGTTTTACTAGTCCTGGCTCTGATTGGGACTTGCATGGTCATTGGGGATGGCATCCTCACGCCGGCTATTTCTGTTTTCTCGGCTGTTTCTGGATTGGAGCTTTCAATGTCGAAGGAGACGCACGCATATGTTGAAGTTCCAGCTTCATGCATCATATTGATAGGGTTGTTTGCTCTTCAACATTATGGCACGCACAGAGTTGGCTTCTTGTTTGCTCCTGTAATTATTGTGTGGCTTCTCTGCATTAGTAGCATTGGAATATACAATATATTTCACTGGAATCCCCATGTATACAAAGCACTCTCTCCATATTATGCTTTCCAACTCTTGAGGAAAACTCAGAAGGGAGGTTGGATGGCCCTTGGTGGAATTTTACTGTGCATCACAGGAGCAGAAGCCATGTTTGCTGATCTTGGGCACTTTAGCCAATTATCAATCAAGATTGCTTTTACATCTGTGGTTTATCCATCTTTAATTCTTGCATATATGGGGCAAGCTGCTTATCTATCTAAACATCATGACATTGAGCAAGATTATCACTTTGGGTTTTACGTATCTGTACCAGAGAAATTGAGATGGCCTGTTCTGGTTATAGCCATACTAGCTGCAGTTGTTGGTAGTCAAGCCATTATCACTGGAACATTCTCAATCATCAAGCAGTGCTCTGCATTAAGTTGCTTCCCGAGAGTTAAAGTGATTCACACATCATCAAAAATTCATGGGCAAATATATATACCTGAGATCAATTGGCTATTGATGATATTGTGCTTGGCAGTAACTATTTGTTTCAGAGACACAAAGCGCCTCGGTAATGCCTCAGGTTTGGCAGTTATCACAGTGATGTTGGTGACCACCTGTTTGATGTCACTGGTTATTGTGCTATGCTGGCACCAGAATGTCCTCCTTGCACTCGGGTTTGTTTTCATATTTGGAACCATTGAGGCTCTCTTCTTCTCTGCTTCTCTTATCAAGTTCCTGCAAGGAGCATGGGTGCCTGTAGCGTTGGCTCTAGTATTTCTGACTTTCATGTATGTTTGGCACTACGGCACACTCAAAAAGTATGAATATGATGTTCAAAACAAGGTTTCCATCAACTGGCTCCTCGGCCTAGGTCCCAGCATAGGTATAGTCCGAGTGCGTGGGGTTGGCCTGATACACACCGAGCTAGTTTCTGGAATTCCAGTAATCTTCTCCCACTTTGTAACCAACCTCCCGGCATTCCATGAAGTCCTAGTTTTCCTCTGCATCAAACACGTGCCAGTTCCACATGTCAGACCTGATGAACGGTTTCTGGTTGGTCGTGTTGGCCCGAGAGAGTTCAGACTCTACCGGTGCATAGTGCGATATGGATACCGTGATGTCCACAAAGATGATGTTGAGTTTGAGAATGATCTTTTGTGCAGCATAGCAGAGTTCATTCGCACAGAAAAAACAGGATTGAACTCCTCAAATGATGAACCCGGAAAGGATGACAAAATGGCAGTTGTCGGAACATGTTCTACACATTCCCTTTTAATGAGTGAGGAGAATGCAGAGAGTGTTGAGAATGTAGAGAATGCAGGGCCATCAGAAGTGAAGGAGATAAAGTCACCAAAGGTTATAAAGCAGCAGAAGAAAAGGGTAAGGTTTTTGGTACCTGAGAGTCCAAAGATTGACACAGAGGCAAAGGAAGAGTTGGAGGAGGTGATGGAAGCAAGAGAAGGTGGGGTAGCCTACATTATAGGACAGACACACATGAGAGCAAAACCAGGGTCTAGCATGGTGAAAAAAATAGCCATTAATATAGTGTATGAATTCCTTAGAAGAAATAGCAGGGCACCCTCCTTTGTCACTGGTGTGCCTCATGCATCATCTCTGGAAGTTGGGATGATGTATCAAGTTTAA 2340 0.4564 MDLEGGTRRYSAKRESWRTVLTLAYQSLGVVYGDLSISPLYVFRSTFAEDIKHTESNDEVFGVLSLVFWTITLVPLVKYVFVVLKADDNGEGGTFALYSLLCRHARVSSLPNCQVADEELSEYKKDSRGAAPERSFALRLKSTFEKHKVLQRVLLVLALIGTCMVIGDGILTPAISVFSAVSGLELSMSKETHAYVEVPASCIILIGLFALQHYGTHRVGFLFAPVIIVWLLCISSIGIYNIFHWNPHVYKALSPYYAFQLLRKTQKGGWMALGGILLCITGAEAMFADLGHFSQLSIKIAFTSVVYPSLILAYMGQAAYLSKHHDIEQDYHFGFYVSVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALSCFPRVKVIHTSSKIHGQIYIPEINWLLMILCLAVTICFRDTKRLGNASGLAVITVMLVTTCLMSLVIVLCWHQNVLLALGFVFIFGTIEALFFSASLIKFLQGAWVPVALALVFLTFMYVWHYGTLKKYEYDVQNKVSINWLLGLGPSIGIVRVRGVGLIHTELVSGIPVIFSHFVTNLPAFHEVLVFLCIKHVPVPHVRPDERFLVGRVGPREFRLYRCIVRYGYRDVHKDDVEFENDLLCSIAEFIRTEKTGLNSSNDEPGKDDKMAVVGTCSTHSLLMSEENAESVENVENAGPSEVKEIKSPKVIKQQKKRVRFLVPESPKIDTEAKEELEEVMEAREGGVAYIIGQTHMRAKPGSSMVKKIAINIVYEFLRRNSRAPSFVTGVPHASSLEVGMMYQV 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01209 779 NCBIfam potassium uptake protein 23 779 IPR003855 GO:0015079|GO:0016020|GO:0071805
Viun2g01209 779 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 13 778 IPR003855 GO:0015079|GO:0016020|GO:0071805
Viun2g01209 779 Pfam K+ potassium transporter 25 605 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01209 Viun-Chr2 22812373 22817517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01209 1 779 Inorganic Solute Cotransporters AT1G70300 74.713 0.0 1217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01209 K03549 - gmx:100793141 1409.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g01209 2 22812373 22817517 Viun2g01209 2 22812373 22817517 ECH
Viun2g01209 2 22812373 22817517 Viun3g03270 3 39638454 39643157 PCT
Viun3g03268 3 39617102 39623140 Viun2g01209 2 22812373 22817517 PCT