Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01208 ATGGCGTCAGGATCATATGCTAACCTACTAGACTTAGCTGGAGGTTTACTTGATATGCCTCCTACACAAAGAACTATTCCAAGGATTATGACAGTTCCTGGAGTTATTTCTGACCTGGATGCTTCTGGTAGATATGACGGTGATTCCGATGTTAGTTCTTCTGGTTACCGGGAGCGGAAAATCCTTGTGGCCAACATGTTGCCATTGCAGGCTAAGAGAGATACGGACACTGGTAAATGGTGCTTCAGTTTGGATGAGGATTCAATTCTGTTACAATTAAAAGATGGTTTTCCTTCTGATACTGAGGTGATCTATGTGGGATCCCTCAAGGTTGAAATAGAGGCCCATGAGCAGGAAGTAGTTGCTCAGAAACTGCAGGAGGACTTTAACTGCATACCTACCTTTTTACCCCATGATCTCATGAAAAACTTTTATCTTGGCTTTTGCAAACAGCAGCTTTGGCCTCTCTTTCATTACATGCTACCTATGTTCCCTGATCATGGTGAGCGGTTTGACCGCACGCTTTGGAAGGCTTATGTTTCTGCAAACAAAATATTTGCAGACAAGGTTATGGAAATAATCAATCCTGATGATGATTTTGTTTGGGTTCAAGACTATCACTTGATGGTTTTGCCTACATTCCTGAGGAAGCGATATAATCGTGTTAAACTTGGATTCTTTCTTCACAGTCCGTTCCCTTCATCTGAAATTTACCGAACTTTGCCTGTAAGGGATGAAATTCTGAGGGGCTTGTTGAATACTGACTTAATTGGCTTCCACACATTTGATTATGCTCGCCACTTTCTTTCTTGTTGCAAAAGAATGCTAGGTCTTGACTACGAATCTAAACGTGGGCATATAGGACTTGATTACTTTGGGCGTACTGTATTTATCAAAATTTTGCCTGTAGGCATTCATATGGGTAGGCTTGAATCTGTATTAAATCTCCAATCTACATCGGCAAAACTGAAAGAAATTCAGGAAGAGTTTAAGGGTAGGAAGGTGATTCTTGGTGTTGATGACATGGATATCTTTAAAGGCATCAGTCTAAAACTTCTAGCTGTTGAGCAGCTGCTGGAGCAGAATCGAGATTTGAAGGGCAAAGTTGTCCTGATACAAATTGTGAATCCTGCTAGGAGTTCAGGCAAGGGTGTTCTGGAAGCAAAAAGGGAAACATATTTAATTGCCCAGAGGATTAATGATACTTATGGCTCAAATAATTATCAGCCAGTTATTCTCATTGACCGTCCTGTTCCTCGTTTTGAAAAGAGTGCCTATTATGCTGTAGCAGAATGTTGCATTGTTAATGCCGTGAGGGATGGTATGAACTTAGTCCCATACAAGTATATTGTCTGCAGACAAGGAACTGCACAGATGGATAAAGCTTTGAGTAGAAAAAGTGATTCTCCCCGTACGAGCACGATAGTTGTGTCTGAGTTCATAGGTTGTTCTCCTTCTCTAAGTGGAGCAATCAGGGTCAATCCCTGGAACATAGACTCTGTGGCTGATGCTCTGTATTCAGCTATTACTATGCATGATTCAGAGAAGCAATTGAGGCACGAGAAACACTACCGGTACATCAGTTCTCATGATGTGGCGTATTGGGCACGCAGCTTTATGCAGGATTTGGAGAGAGCATGCAAAGATCATTACACCAAAAGGTGCTGGGGAATGGGTTTGGGCCTAGGGTTTAGAGTTGTTTCTCTTTCTCCTGGTTTTAGAAAATTGTCTGTTGATCACATTGTTTCAGCATACAAAAGAACTGATAAACGAGCTATATTTCTTGATTATGATGGTACTATCGTATCAAAATCTTCTATAAACAAGACCCCCAGCCCTGAAGTCATATCCGTGCTAAATGACATGTGTAATGATCCTAAAAATACACTCTTCATTGTGAGTGGAAGGTCAAGAGATTCTTTAAGTAATTGGTTTAGTTCATGCAAAATGATTGGACTTGCTGCCGAACATGGATACTTTTTAAGGTGGAACAAAGACTCTGAGTGGGAAACTAGTCACTTGTCTTCTGATCTTGATTGGAAGAAGATTGTGGAACCTGTCATGCAATTGTATACGGAGGCAACTGATGGATCTAATATTGAAACTAAGGAAAGTGCTTTGGTGTGGCATCATCAAGATGCGGACCCTGATTTTGGCTCTTGCCAGGCCAAAGAATTGTTAAATCATCTGGAAAGTGTCCTTGCCAATGAACCTGCAGTTGTCACCCGGGGCCAACATATTGTTGAAGTCAAGCCACAGGGGTTAAACAAGGGCCTGGTAACTGAAAAGATTCTTTCCACTATGGTTAATGGTGGTAACCCCCCAGATTTTGTTATGTGTGTGGGAGATGACATTTCCGATGAAGACATGTTTGAGAGCATATTAAGGACAGTTTCATGCCCATCATTACCGGTAGTTCCAGAGATCTTTGCCTGCACTGTTGGTCAGAAACCCAGTAAGGCGAAATATTATCTGGATGATTCTGCTGATGTCACGAAGTTGCTTCATGGCCTCGGTGCTTCATCTAAACCAAAGCCCAGGAATCTAGCACAATTCCAAGTTTCCTTTGAAAGCATGGCTTGA 2583 0.417 MASGSYANLLDLAGGLLDMPPTQRTIPRIMTVPGVISDLDASGRYDGDSDVSSSGYRERKILVANMLPLQAKRDTDTGKWCFSLDEDSILLQLKDGFPSDTEVIYVGSLKVEIEAHEQEVVAQKLQEDFNCIPTFLPHDLMKNFYLGFCKQQLWPLFHYMLPMFPDHGERFDRTLWKAYVSANKIFADKVMEIINPDDDFVWVQDYHLMVLPTFLRKRYNRVKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNTDLIGFHTFDYARHFLSCCKRMLGLDYESKRGHIGLDYFGRTVFIKILPVGIHMGRLESVLNLQSTSAKLKEIQEEFKGRKVILGVDDMDIFKGISLKLLAVEQLLEQNRDLKGKVVLIQIVNPARSSGKGVLEAKRETYLIAQRINDTYGSNNYQPVILIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTAQMDKALSRKSDSPRTSTIVVSEFIGCSPSLSGAIRVNPWNIDSVADALYSAITMHDSEKQLRHEKHYRYISSHDVAYWARSFMQDLERACKDHYTKRCWGMGLGLGFRVVSLSPGFRKLSVDHIVSAYKRTDKRAIFLDYDGTIVSKSSINKTPSPEVISVLNDMCNDPKNTLFIVSGRSRDSLSNWFSSCKMIGLAAEHGYFLRWNKDSEWETSHLSSDLDWKKIVEPVMQLYTEATDGSNIETKESALVWHHQDADPDFGSCQAKELLNHLESVLANEPAVVTRGQHIVEVKPQGLNKGLVTEKILSTMVNGGNPPDFVMCVGDDISDEDMFESILRTVSCPSLPVVPEIFACTVGQKPSKAKYYLDDSADVTKLLHGLGASSKPKPRNLAQFQVSFESMA 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01208 860 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 720 851 - -
Viun2g01208 860 FunFam Trehalose-6-phosphate synthase 2 674 753 - -
Viun2g01208 860 Gene3D Glycogen Phosphorylase B; 53 312 - -
Viun2g01208 860 SUPERFAMILY HAD-like 591 838 IPR036412 -
Viun2g01208 860 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 590 707 - -
Viun2g01208 860 Pfam Glycosyltransferase family 20 59 544 IPR001830 GO:0003824|GO:0005992
Viun2g01208 860 CDD HAD_TPP 592 831 - -
Viun2g01208 860 NCBIfam HAD-IIB family hydrolase 592 793 IPR006379 -
Viun2g01208 860 Gene3D - 590 708 IPR023214 -
Viun2g01208 860 Gene3D - 720 850 IPR023214 -
Viun2g01208 860 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 52 311 - -
Viun2g01208 860 NCBIfam trehalose-phosphatase 590 836 IPR003337 GO:0003824|GO:0005992
Viun2g01208 860 CDD GT20_TPS 59 544 IPR001830 GO:0003824|GO:0005992
Viun2g01208 860 Gene3D Glycogen Phosphorylase B; 313 528 - -
Viun2g01208 860 FunFam Alpha,alpha-trehalose-phosphate synthase 313 528 - -
Viun2g01208 860 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 59 548 - -
Viun2g01208 860 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 28 840 IPR001830 GO:0003824|GO:0005992
Viun2g01208 860 Pfam Trehalose-phosphatase 594 828 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01208 Viun-Chr2 22795857 22801058 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01208 1 859 Trehalose Biosynthesis Gene Families AT1G23870 72.780 0.0 1330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01208 K16055 - gmx:100818536 1619.36