Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01197 ATGAGAAGTGAAGAAGGATTGAGAGAGAGAGAGAGAATGGTGGGTGTAGGATTAGGTGTGACAGCAGCAATGATTGGAACTCAGTTCTTGGAAGTGGGTCTCAACACTCTAATCAAACAAGCAAACACCAACGGAATGAGTAATTTTGTCTTCATTGTGTATTCTAACTTCTTCGCTCTCTTCGTCCTCGCCCCAACAACCTTCTTCTACCACAGGAAGAGAGCTCCTCCTACAATCCCAAGATCAATTCTCTGTAAAATGTTTGCCATTAGCTGCCTCAGCACTGTAGTGCAGACGTTGATGTACACCGGAATCTCATACAGCTCTCCCACACTATGTTCTGCTATGGTTGACCTTGTTCCTGCTTTTACCTTCATCTTTGCCCTTTTTTCAAGGATGGAAAATCTGAATCTAAAACAGCATAGCTGCCAGGCAAAAGTTATGGGCACAGTGGTCTCCATTGCAGGGGCATTCATAGTGACTCTATATAAAGGAACGCCATTGAATTTCAGTTTGTTGAGAAATGGAACTTACCTTTCAACGCAATCAGATTGGATCATTGGTGGTTTTCTTCTTGCAATTTCTAGTCTCTGCATTTCAGTTTTGCTTATTGTTCAGACTTCGGCTGTGAAGGAATATCCTGAAGAGTTAGTGATAACAACCACTTGTTGCAGCATGGTGGTCATCTTATCTGCCATAGTTGCTCTGTTTGCAGAGGGAAATCCAAAAGCTTGGATATTCACATCTCACAAAGAGTTCATAGCTGTATTTTATTCGGCAATATTTGTGGTATCAATGAGGAGTGTTGTGTGCACATGGGGATGTCGAAAGAAGGGACCAGTTTACGTAGCAATGTTTAACCCTTTGGGAATGGTGATTGCACTTGGCATGGGGGTAATATTTCTGGGAGAGAGTCTTTATCTTGGAAGTGTGATTGGAGCTGCTACGATAGGTATTGGATTTTATTTGGTGATGTGGGCACATGCTGAAGACAGTAATGTGGCAGAGGAGAATACTGTGACTTCCTCTGCAGCTCCTCTATTGTCTACCAAAAGCATCGATGTATAG 1068 0.426 MRSEEGLRERERMVGVGLGVTAAMIGTQFLEVGLNTLIKQANTNGMSNFVFIVYSNFFALFVLAPTTFFYHRKRAPPTIPRSILCKMFAISCLSTVVQTLMYTGISYSSPTLCSAMVDLVPAFTFIFALFSRMENLNLKQHSCQAKVMGTVVSIAGAFIVTLYKGTPLNFSLLRNGTYLSTQSDWIIGGFLLAISSLCISVLLIVQTSAVKEYPEELVITTTCCSMVVILSAIVALFAEGNPKAWIFTSHKEFIAVFYSAIFVVSMRSVVCTWGCRKKGPVYVAMFNPLGMVIALGMGVIFLGESLYLGSVIGAATIGIGFYLVMWAHAEDSNVAEENTVTSSAAPLLSTKSIDV 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01197 355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 244 328 - -
Viun2g01197 355 PANTHER WAT1-RELATED PROTEIN 21 332 IPR030184 GO:0016020|GO:0022857
Viun2g01197 355 Pfam EamA-like transporter family 24 161 IPR000620 GO:0016020
Viun2g01197 355 Pfam EamA-like transporter family 188 325 IPR000620 GO:0016020
Viun2g01197 355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01197 Viun-Chr2 22699222 22702421 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01197 18 354 Nodulin-like Gene Family AT3G28050 42.340 1.36e-75 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01197 - - vun:114173029 683.33