Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01190 ATGGTGAGCGGAGACGTAACCACAGTGATGATGGTGTCACTGGTTTTGACTGTCGGTTTGAACACTCTGGTGAAAGCAAACCTCTCCAAAGGCATGAGCAATTTCGTTTTCGTTGCTTATTCCAACCTCTTCGGATTCTGTTTCCTGCTAATTGCAACCACCCTTCGTTACAGGAACACCTCTCCCCCACCGATCAATAACTCCATTCTCTTTAGAGCTTTTCTCATTGGCTTCTTCGGCGTTTTCATTGAAACGCTCTCTTATACCGGGCTTCGATACGGCTCTCCCACTCTCAGCTCAGCCATAGAAGATCTTCTTCCAGCTTTCACTTTCATAATCGCCGTTGTTTTCAGGATGGAAAAGCTGGACCTGAAAGTAAGAAGCTGTCAAGCAAAAATCATTGGGACTGTGGTCTCAATTGCAGGGGCATTAATGGTGACTTTATACAAAGGTTTGGCAATAACAAGTGGTGTGATGCGAAACGACTTTTTTCTCTCATCTCAACAATCACAATGGCTACTAGGAGGATTTTTCCTATCAATGGCTACCTTTTCTGCTTCAGTCTCGATTGTTATACAGACATGGACAATTAAGGACTACCCAGAGGAGCTAATGCTAATAACCATTGCTACCAGTTTCTCTGTAATCCTATCTTTCGTAGTTGCTTTCATTGCAGAGAAAAATCCCAAGGCTTGGATACTTAAGCCTGATATGGAATTAGTGTGCATGTTGTGTACAGGTATTATAGTGATATGTACAAGAGGTGTGGTGGATGCATGGGCATGTCGAAAGATGGGAGCTGTATATGCTGCTATGTTCAGTCCTATAGGAATTGTGATTGCACTTGCTATGGGGATTGTATTTTTAGGAGACACTCTTTATCTTGGAAGTGTGATAGGAGCTGCTATAATAGCTATCGGATTTTATGCTGTATTATGGGGTCGGGCTCAAGAGGAAAGTAAGACTAGTGAAAAACATGAAGCCTATGGCATTATCTCTTCATCTTCATCCGGTTCTGAAACCATCCTCTTACTGCATACAAGCAAAGACACAATGATAACATAA 1065 0.4235 MVSGDVTTVMMVSLVLTVGLNTLVKANLSKGMSNFVFVAYSNLFGFCFLLIATTLRYRNTSPPPINNSILFRAFLIGFFGVFIETLSYTGLRYGSPTLSSAIEDLLPAFTFIIAVVFRMEKLDLKVRSCQAKIIGTVVSIAGALMVTLYKGLAITSGVMRNDFFLSSQQSQWLLGGFFLSMATFSASVSIVIQTWTIKDYPEELMLITIATSFSVILSFVVAFIAEKNPKAWILKPDMELVCMLCTGIIVICTRGVVDAWACRKMGAVYAAMFSPIGIVIALAMGIVFLGDTLYLGSVIGAAIIAIGFYAVLWGRAQEESKTSEKHEAYGIISSSSSGSETILLLHTSKDTMIT 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01190 354 PANTHER WAT1-RELATED PROTEIN 9 323 IPR030184 GO:0016020|GO:0022857
Viun2g01190 354 SUPERFAMILY Multidrug resistance efflux transporter EmrE 231 316 - -
Viun2g01190 354 Pfam EamA-like transporter family 10 147 IPR000620 GO:0016020
Viun2g01190 354 Pfam EamA-like transporter family 175 312 IPR000620 GO:0016020
Viun2g01190 354 SUPERFAMILY Multidrug resistance efflux transporter EmrE 42 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01190 Viun-Chr2 22666648 22679630 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01190 8 350 Nodulin-like Gene Family AT3G28050 40.282 7.93e-79 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01190 - - gmx:100814600 466.077