Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01189 ATGGTGAGCGGAGACGTAACCACAGTGATGATGGTGTCACTGGTTTTGACTGTCGGTTTGAACACTCTGGTGAAAGCAAACCTCTCCAAAGGCATGAGCAATTTCGTTTTCGTTGCTTATTCCAACCTCTTCGGATTCTGTTTCCTGCTAATTGCAACCACCCTTCGTTACAGGAACACCTCTCCCCCACCGATCAATAACTCCATTCTCTTTAGAGCTTTTCTCATTGGCTTCTTCGGCGTTTTCATTGAAACGCTCTCTTATACCGGGCTTCGATACGGCTCTCCCACTCTCAGCTCAGCCATAGAAGATCTTCTTCCAGCTTTCACTTTCATAATCGCCGTTGTTTTCAGGATGGAAAAGCTGGACCTGAAAGTAAGAAGCTGTCAAGCAAAAATCATTGGGACTGTGGTCTCAATTGCAGGGGCATTAATGGTGACTTTATACAAAGGTTTGGCAATAACAAGTGGTGTGATGCGAAACGACTTTTTTCTCTCATCTCAACAATCACAATGGCTACTAGGAGGATTTTTCCTATCAATGGCTACCTTTTCTGCTTCAGTCTCGATTGTTATACAGACATGGACAATTAAGGACTACCCAGAGGAGCTAATGCTAATAACCATTGCTACCAGTTTCTCTGTAATCCTATCTTTCGTAGTTGCTTTCATTGCAGAGAAAAATCCCAAGGCTTGGATACTTAAGCCTGATATGGAATTAGTGTGCATGTTGTGTACAGGTATTATAGTGATATGTACAAGAGGTGTGGTGGATGCATGGGCATGTCGAAAGATGGGAGCTGTATATGCTGCTATGTTCAGTCCTATAGGAATTGTGATTGCACTTGCTATGGGGATTGTATTTTTAGGAGACACTCTTTATCTTGGAAGGAGCTGCTATAATAGCTATCGGATTTTATGCTGTATTATGGGGTCGGGCTCAAGAGGAAAGTAA 954 0.4287 MVSGDVTTVMMVSLVLTVGLNTLVKANLSKGMSNFVFVAYSNLFGFCFLLIATTLRYRNTSPPPINNSILFRAFLIGFFGVFIETLSYTGLRYGSPTLSSAIEDLLPAFTFIIAVVFRMEKLDLKVRSCQAKIIGTVVSIAGALMVTLYKGLAITSGVMRNDFFLSSQQSQWLLGGFFLSMATFSASVSIVIQTWTIKDYPEELMLITIATSFSVILSFVVAFIAEKNPKAWILKPDMELVCMLCTGIIVICTRGVVDAWACRKMGAVYAAMFSPIGIVIALAMGIVFLGDTLYLGRSCYNSYRILCCIMGSGSRGK 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01189 317 Pfam EamA-like transporter family 10 147 IPR000620 GO:0016020
Viun2g01189 317 PANTHER WAT1-RELATED PROTEIN 9 300 IPR030184 GO:0016020|GO:0022857
Viun2g01189 317 SUPERFAMILY Multidrug resistance efflux transporter EmrE 42 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01189 Viun-Chr2 22666648 22679631 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01189 8 296 Nodulin-like Gene Family AT3G28050 40.678 3.72e-63 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01189 - - gmx:100792641 421.779