Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01188 ATGCAGAGCGCAGAGGTAACCACAGTGATGGTGGTGCTCCTGTTTTTGACTGTGGGTTCGACCACTCTGGTGAAAGCAAGCATGTCGAAAGGCATGAGCAATTACGTTTTCGCTGCTTATTCCAACCTCCTCGGATTCTGTTTCCTGCTAATTGCAACCACCCTTCATTACAGGAACAGATCTCCCACACCGCTCAATAACTTCATTCTCTTCAGAATTTTTCTCATTGGCTTCTTCAGCGTTTCCATTCAGACGTTTCTCTATGTTGGACTTGGATATAGCTCCCCGGCTCTCTACTCAGCCATCGAAGATCTTCTTCCAGCTTTCACTTTCTTTATCGCCATTGTTTTCAGGATGGAAAAGCTGGACCTAAAACTAAGAAGCTGCCAAGCAAAAACTATTGGGACTGTGGTCTCAATTGCAGGGGCATTAATAGTGACTTTTTACAAAGGTTTGCCTATGACAAATGGTGCCATGCCAAACAATTTATCTCTCTCATCTCAACAATCACAATGGCTACTAGGAGGATTTCTCCTATCAACTGGTACTTTTTGTTGTTCAGTCTCTCTTGTTATACAGACATGGACTATTAAGGACTACCCAGAGGAGCTAATGCTAATGACCGTTGCTACCAGTTTCACTGTAATCCTGTCTTTCGTTGTAGCTTTCGTTGCAGAGCAAAATCCTGAGGCATGGATACTTAAGCCTGATATGGAATTGGTGTGCATATTGTATTCAGCCATTGTAGTGCTGGCTACACGAAGTGTGGTGTATGCATGGGCATGTCGAAAGAAGGGAGCTGTATATGTTGCTATGTTCAGTCCTTTAGGAATTGTGATTGCACTTGCTATGGGTATTGTGTTTTTGGGAGACACTCTATATCTTGGAAGTGTTATAGGAGCTGCTACAATAGTTGTTGGGTTTTATGCTGTGATATGGGGTCAGGCTCAAGAGGAAAATATTTGTGAGAAACATGGAACCTGTAACATTATCTCTTCATCTTCATCTTGTTCTGAAGTCACCCTCTTGCTGAATAAAAACAAAGACACAATGATAGTATGA 1062 0.4237 MQSAEVTTVMVVLLFLTVGSTTLVKASMSKGMSNYVFAAYSNLLGFCFLLIATTLHYRNRSPTPLNNFILFRIFLIGFFSVSIQTFLYVGLGYSSPALYSAIEDLLPAFTFFIAIVFRMEKLDLKLRSCQAKTIGTVVSIAGALIVTFYKGLPMTNGAMPNNLSLSSQQSQWLLGGFLLSTGTFCCSVSLVIQTWTIKDYPEELMLMTVATSFTVILSFVVAFVAEQNPEAWILKPDMELVCILYSAIVVLATRSVVYAWACRKKGAVYVAMFSPLGIVIALAMGIVFLGDTLYLGSVIGAATIVVGFYAVIWGQAQEENICEKHGTCNIISSSSSCSEVTLLLNKNKDTMIV 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01188 353 PANTHER WAT1-RELATED PROTEIN 7 327 IPR030184 GO:0016020|GO:0022857
Viun2g01188 353 SUPERFAMILY Multidrug resistance efflux transporter EmrE 232 316 - -
Viun2g01188 353 SUPERFAMILY Multidrug resistance efflux transporter EmrE 42 150 - -
Viun2g01188 353 Pfam EamA-like transporter family 10 147 IPR000620 GO:0016020
Viun2g01188 353 Pfam EamA-like transporter family 174 312 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01188 Viun-Chr2 22654229 22662012 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01188 17 327 Nodulin-like Gene Family AT5G40240 41.066 6.94e-77 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01188 - - gmx:100792641 485.723