Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01187 ATGCAGAGCGCAGAGGTAACCACAGTGATGGTGGTGCTCCTGTTTTTGACTGTGGGTTCGACCACTCTGGTGAAAGCAAGCATGTCGAAAGGCATGAGCAATTACGTTTTCGCTGCTTATTCCAACCTCCTCGGATTCTGTTTCCTGCTAATTGCAACCACCCTTCATTACAGGAACAGATCTCCCACACCGCTCAATAACTTCATTCTCTTCAGAATTTTTCTCATTGGCTTCTTCAGCGTTTCCATTCAGACGTTTCTCTATGTCGGACTTGGATATAGCTCCCCGACTCTCTGCTCAGCCATCGAAGATCTTCTTCCAGCTTTCACTTTCTTAATCGCCACTGTTTTCAGGATGGAAAAGCTGGACCTAAAACTAAGAAGCTGCCAAGCAAAAACTATTGGGACTGTGGTCTCAATTGCAGGGGCATTTATAGTGACTTTTTACAAAGGTTTGCCTATGACAAATGGTGTCATGCCAAACAATTTATTTCTCTCATCTCAACAATCACAATGGCTACTAGGAGGATTTCTCCTATCAACTGGTACTTTTTGTGGTTCAGTCTCTCTTGTTATACAGACATGGACTATTAAGGACTATCCAGAGGAGCTAATGCTAATAACCATTGCTACCAGTTTCTCTGTAATCCTATCTTTCGTTGTAGCTTTCGTTGCAGAGCAAAATCCCAAGGCATGGATACTTAAGCCTGATATGGAATTGGTGTGCATATTGTATTCAGCCATTGTAGTGCTGTCTACACGAAGTGTGGTGTATGCATGGGCATGTCGAAAGAAGGGAGCTGTATATGTTGCTATGTTCAGTCCTTTAGGAATTGTGATTGCACTTGCCATGGGGATTGTGTTTTTGGGAGACACTCTATATCTTGGAAGTGTGATAGGTGCTGCTACAATAGCTGTTGGGTTTTATGCTGTGATATGGGGTCAGGCTCAAGAGGAAAATATTTGTGAAAAACATGGAACCTGTAGCATTATCTCTTCATCTTCATCTTGTTCTGAAGCCACCCTCTTTCTGAATAAAAGCAAAGACACAATGATTGTATGA 1062 0.4247 MQSAEVTTVMVVLLFLTVGSTTLVKASMSKGMSNYVFAAYSNLLGFCFLLIATTLHYRNRSPTPLNNFILFRIFLIGFFSVSIQTFLYVGLGYSSPTLCSAIEDLLPAFTFLIATVFRMEKLDLKLRSCQAKTIGTVVSIAGAFIVTFYKGLPMTNGVMPNNLFLSSQQSQWLLGGFLLSTGTFCGSVSLVIQTWTIKDYPEELMLITIATSFSVILSFVVAFVAEQNPKAWILKPDMELVCILYSAIVVLSTRSVVYAWACRKKGAVYVAMFSPLGIVIALAMGIVFLGDTLYLGSVIGAATIAVGFYAVIWGQAQEENICEKHGTCSIISSSSSCSEATLFLNKSKDTMIV 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01187 353 Pfam EamA-like transporter family 175 312 IPR000620 GO:0016020
Viun2g01187 353 Pfam EamA-like transporter family 10 147 IPR000620 GO:0016020
Viun2g01187 353 PANTHER WAT1-RELATED PROTEIN 7 327 IPR030184 GO:0016020|GO:0022857
Viun2g01187 353 SUPERFAMILY Multidrug resistance efflux transporter EmrE 42 149 - -
Viun2g01187 353 SUPERFAMILY Multidrug resistance efflux transporter EmrE 232 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01187 Viun-Chr2 22646774 22651369 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01187 17 327 Nodulin-like Gene Family AT5G40240 41.250 1.85e-76 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01187 - - gmx:100792641 497.278