Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01186 ATGGCAAGATTGGGGAATGGAAGTGCCAAATTACTGCCATTTGTGGGAATGATGGTGGCTATGCTAACTCAAAGTGGAAGCATGGTGGTCATAAAATTTGCCATGATTGATGATATCAACAAATATGCAATGGTTGTCTACTCTTTTGCACTCTCCACTATCTTGCTTCTTCCCTTTGCCTTCTTTCTCTACAGATCAGAACGTCCTCCTCTCACGTTCTCTGCACTCTGCAGCTTCTTTCTGCTTGCATTCTTTGGGAGTTCAGGAACTATAATGGCTTACGTTGGAATAGAACTGAGCTCGCCGACACTTGCATCAGCCCTTCTCAACCTCGTTCCAGCTTTCACTTTTATACTTGCTCTCATTTTCAGGATGGAAGAAGTACATTGGAGGAACTCAAGCAGCCAAGCTAAAGTGTTAGGAACAATAGCATCAATTGGAGGAGTTGTTGTGATACTGTACAAGGGTCCACTCATCTTTAAGACACGTTCATCCAACTTTTCAAACCAAATACTTCAATTTTCACCACAGCTAAATTGGATCTTAGGAGGGATATTCTGCATTGCAGATTCACTCTTTACTTCCATGTGGTACATATATCAGGCTTCGGTAGCAAAGAAATACCCTGCTGTAACAGTGATTGTATTCTTCCAACTCTTATCTTCAACCGTGCAGTGTGGAGTATTTGCCTTAATTGCTGTGAGGGATTCAACTGAATGGAAGCTCAACTTCGATATAGGGCTGATTGGCGTTCTATACCAGGCAATAGTTGCAACAATGATACGTTACCTACTATGCACATGGTACGTCCTTAAAGCTGGTCCTCTGTTTTGTTCTATGTTCAAACCTGTGGCAATCATTTTCACCGCCATCATGGGTGCAGTCTTTCTTGGAGATGATTTCAGTCTTGGAAGTTTGATTGGTGCGGTTATAATCGTGGTTGGATTTTATGGTGTATTGTGGGGGAAATCGAAAGAGGAGAATGAGATTGCAGAAAGGGTTGAGGGCTTCGAGTCATCATGCCATGATGTTCCTTTGTTGCAAGATCGGAACAGGTTGAAGCTTTGA 1068 0.4251 MARLGNGSAKLLPFVGMMVAMLTQSGSMVVIKFAMIDDINKYAMVVYSFALSTILLLPFAFFLYRSERPPLTFSALCSFFLLAFFGSSGTIMAYVGIELSSPTLASALLNLVPAFTFILALIFRMEEVHWRNSSSQAKVLGTIASIGGAXVVILYKGPLIFKTRSSNFSNQILQFSPQLNWILGGIFCIADSLFTSMWYIYQASVAKKYPAVTVIVFFQLLSSTVQCGVFALIAVRDSTEWKLNFDIGLIGVLYQAIVATMIRYLLCTWYVLKAGPLFCSMFKPVAIIFTAIMGAVFLGDDFSLGSLIGAVIIVVGFYGVLWGKSKEENEIAERVEGFESSCHDVPLLQDRNRLKL 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01186 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 242 326 - -
Viun2g01186 356 Pfam EamA-like transporter family 16 153 IPR000620 GO:0016020
Viun2g01186 356 Pfam EamA-like transporter family 184 321 IPR000620 GO:0016020
Viun2g01186 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 155 - -
Viun2g01186 356 PANTHER WAT1-RELATED PROTEIN 13 332 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01186 Viun-Chr2 22641589 22644384 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01186 10 348 Nodulin-like Gene Family AT5G40240 39.710 3.19e-72 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01186 - - gmx:100792109 530.02