Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01183 ATGGCAAGATTGGGGAATGGAAGTGCCAAATTACTGCCATTTGTGGGAATGATGGTGGCTATGCTAACTCAAAGTGGAAGCATGGTGGTCATAAAATTTGCCATGATTGATGATATCAACAAATATGTAATGGTTGTCTACTCTTTTGCACTCTCCACTATCTTGCTTCTTCCCTTTGCCTTCTTTCTCCACAGGTCAGAACGTCCTCCTCTCACGTTCTCTTTACTCTGCAAATTCTTTCTTCTTGCATTCTTTGGGAGTGCAGCAACTACAATGGGTTATGTTGGAATAGAACTGAGCTCGCCGACACTTGGATCAGACCTTCTTAGCCTCGTTCCAGCTTTCACTTTTATACTTGCTCTCATTTTCAGGATGGAAGAAGTACATTGGAGGAACTCAAGCAGCCAAGCTAAAGTGTTAGGAACAATAACATCAATTGCAGGAGCATTTGTTGTGGTACTGTACAAGGGTCCAATCATCTTTAAGACACGTTCGTCCAACTTTTCTAACCAAATACTTCAATTTTCACAACAGCTAAATTGGATATTGGGAGGGATATTCTTTATTGCATATTCACTCTTTAATTCCATGTGGTACATATATCAGGCTTATGTAGCAAAGAAATACCCTGATGTAACAGTGACTGTATTCTTTCAACTCTTATTTTCAACCGTGCAGTGTGGAGTATTTGCCTTAATTGCTGTGAGGGATCCAACTGAATGGAAGCTCAACTTCGATATAGGCCTGGTTGGCGTTCTATATCAGGCAATAGTTGCAACAATGATATCTTACCTGCTATTCCAATGGTGCGTCCTTAAAGCTGGTCCTTTGTTTTGTTCTATGTTCAGTCCTGTGGCAATGATCTTCACCGTTTTCATGGGTGCAATCTTTCTTGGAGATGATTTAAGTCTTGGAAGTTTGATTGGTGCGGTTATAATCGTGGTTGGATTTTATGGTGTATTGTGGGGGAAATCGAAAGAGGAGAATGAGATTGCAGAAGGGGTTGAGGACTTCGACTCATCATTCCATGATGTTCCTTTGTTGCAAGACAGGAACAGGTTGAAGCTTCGAAGGTTTTATCACCCTTATATTTGGGAAAGTTTTGGATATTAA 1113 0.4061 MARLGNGSAKLLPFVGMMVAMLTQSGSMVVIKFAMIDDINKYVMVVYSFALSTILLLPFAFFLHRSERPPLTFSLLCKFFLLAFFGSAATTMGYVGIELSSPTLGSDLLSLVPAFTFILALIFRMEEVHWRNSSSQAKVLGTITSIAGAFVVVLYKGPIIFKTRSSNFSNQILQFSQQLNWILGGIFFIAYSLFNSMWYIYQAYVAKKYPDVTVTVFFQLLFSTVQCGVFALIAVRDPTEWKLNFDIGLVGVLYQAIVATMISYLLFQWCVLKAGPLFCSMFSPVAMIFTVFMGAIFLGDDLSLGSLIGAVIIVVGFYGVLWGKSKEENEIAEGVEDFDSSFHDVPLLQDRNRLKLRRFYHPYIWESFGY 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01183 370 PANTHER WAT1-RELATED PROTEIN 13 332 IPR030184 GO:0016020|GO:0022857
Viun2g01183 370 SUPERFAMILY Multidrug resistance efflux transporter EmrE 242 326 - -
Viun2g01183 370 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
Viun2g01183 370 Pfam EamA-like transporter family 16 153 IPR000620 GO:0016020
Viun2g01183 370 Pfam EamA-like transporter family 184 321 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01183 Viun-Chr2 22635029 22637412 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01183 11 329 Nodulin-like Gene Family AT5G40240 41.231 7.54e-75 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01183 - - gmx:100792109 517.309