Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01182 ATGGCAAGATTGGGGAATGGAAGTGCCAAATTACTGCCATTTGTGGGAATGATGGTGGCTATGCTAACTCAAAGTGGAAGCATGGTGGTCATAAAATTTGCCATGATTGATGATATCAACAAATATGTAATGGTTGTCTACTCTTTTGCACTCTCCACTATCTTGCTTCTTCCCTTTGCCTTCTTTCTCCACAGGAGTGCAGCAACTACAATGGGTTATGTTGGAATAGAACTGAGCTCGCCGACACTTGGATCAGACCTTCTTAGCCTCGTTCCAGCTTTCACTTTTATACTTGCTCTCATTTTCAGGATGGAAGAAGTACATTGGAGGAACTCAAGCAGCCAAGCTAAAGTGTTAGGAACAATAACATCAATTGCAGGAGCATTTGTTGTGGTACTGTACAAGGGTCCAATCATCTTTAAGACACGTTCGTCCAACTTTTCTAACCAAATACTTCAATTTTCACAACAGCTAAATTGGATATTGGGAGGGATATTCTTTATTGCATATTCACTCTTTAATTCCATGTGGTACATATATCAGGCTTATGTAGCAAAGAAATACCCTGATGTAACAGTGACTGTATTCTTTCAACTCTTATTTTCAACCGTGCAGTGTGGAGTATTTGCCTTAATTGCTGTGAGGGATCCAACTGAATGGAAGCTCAACTTCGATATAGGCCTGGTTGGCGTTCTATATCAGGCAATAGTTGCAACAATGATATCTTACCTGCTATTCCAATGGTGCGTCCTTAAAGCTGGTCCTTTGTTTTGTTCTATGTTCAGTCCTGTGGCAATGATCTTCACCGTTTTCATGGGTGCAATCTTTCTTGGAGATGATTTAAGTCTTGGAAGTTTGATTGGTGCGGTTATAATCGTGGTTGGATTTTATGGTGTATTGTGGGGGAAATCGAAAGAGGAGAATGAGATTGCAGAAGGGGTTGAGGACTTCGACTCATCATTCCATGATGTTCCTTTGTTGCAAGACAGGAACAGGTTGAAGCTTCGAAGGTTTTATCACCCTTATATTTGGGAAAGTTTTGGATATTAA 1050 0.4048 MARLGNGSAKLLPFVGMMVAMLTQSGSMVVIKFAMIDDINKYVMVVYSFALSTILLLPFAFFLHRSAATTMGYVGIELSSPTLGSDLLSLVPAFTFILALIFRMEEVHWRNSSSQAKVLGTITSIAGAFVVVLYKGPIIFKTRSSNFSNQILQFSQQLNWILGGIFFIAYSLFNSMWYIYQAYVAKKYPDVTVTVFFQLLFSTVQCGVFALIAVRDPTEWKLNFDIGLVGVLYQAIVATMISYLLFQWCVLKAGPLFCSMFSPVAMIFTVFMGAIFLGDDLSLGSLIGAVIIVVGFYGVLWGKSKEENEIAEGVEDFDSSFHDVPLLQDRNRLKLRRFYHPYIWESFGY 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01182 349 SUPERFAMILY Multidrug resistance efflux transporter EmrE 221 305 - -
Viun2g01182 349 PANTHER WAT1-RELATED PROTEIN 13 311 IPR030184 GO:0016020|GO:0022857
Viun2g01182 349 Pfam EamA-like transporter family 163 300 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01182 Viun-Chr2 22635029 22637412 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01182 11 308 Nodulin-like Gene Family AT5G40240 39.077 8.06e-68 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01182 - - gmx:100792109 469.544