Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01181 ATGGCAAGATTGGGGAATGGAAGTGCCAAATTACTGCCATTTGTGGGAATGATGGTGGCTATGCTAACTCAAAGTGGAAGCATGGTGGTCATAAAATTTGCCATGATTGATGATATCAACAAATATGTAATGGTTGTCTACTCTTTTGCACTCTCCACTATCTTGCTTCTTCCCTTTGCCTTCTTTCTCCACAGGTCAGAACGTCCTCCTCTCACGTTCTCTTTACTCTGCAAATTCTTTCTTCTTGCATTCTTTGGGAGTGCAGCAACTACAATGGGTTATGTTGGAATAGAACTGAGCTCGCCGACACTTGGATCAGACCTTCTTAGCCTCGTTCCAGCTTTCACTTTTATACTTGCTCTCATTTTCAGGATGGAAGAAGTACATTGGAGGAACTCAAGCAGCCAAGCTAAAGTGTTAGGAACAATAACATCAATTGCAGGAGCATTTGTTGTGCTAAATTGGATATTGGGAGGGATATTCTTTATTGCATATTCACTCTTTAATTCCATGTGGTACATATATCAGGCTTATGTAGCAAAGAAATACCCTGATGTAACAGTGACTGTATTCTTTCAACTCTTATTTTCAACCGTGCAGTGTGGAGTATTTGCCTTAATTGCTGTGAGGGATCCAACTGAATGGAAGCTCAACTTCGATATAGGCCTGGTTGGCGTTCTATATCAGGCAATAGTTGCAACAATGATATCTTACCTGCTATTCCAATGGTGCGTCCTTAAAGCTGGTCCTTTGTTTTGTTCTATGTTCAGTCCTGTGGCAATGATCTTCACCGTTTTCATGGGTGCAATCTTTCTTGGAGATGATTTAAGTCTTGGAAGTTTGATTGGTGCGGTTATAATCGTGGTTGGATTTTATGGTGTATTGTGGGGGAAATCGAAAGAGGAGAATGAGATTGCAGAAGGGGTTGAGGACTTCGACTCATCATTCCATGATGTTCCTTTGTTGCAAGACAGGAACAGGTTGAAGCTTCGAAGGTTTTATCACCCTTATATTTGGGAAAGTTTTGGATATTAA 1035 0.4087 MARLGNGSAKLLPFVGMMVAMLTQSGSMVVIKFAMIDDINKYVMVVYSFALSTILLLPFAFFLHRSERPPLTFSLLCKFFLLAFFGSAATTMGYVGIELSSPTLGSDLLSLVPAFTFILALIFRMEEVHWRNSSSQAKVLGTITSIAGAFVVLNWILGGIFFIAYSLFNSMWYIYQAYVAKKYPDVTVTVFFQLLFSTVQCGVFALIAVRDPTEWKLNFDIGLVGVLYQAIVATMISYLLFQWCVLKAGPLFCSMFSPVAMIFTVFMGAIFLGDDLSLGSLIGAVIIVVGFYGVLWGKSKEENEIAEGVEDFDSSFHDVPLLQDRNRLKLRRFYHPYIWESFGY 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01181 344 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 152 - -
Viun2g01181 344 Pfam EamA-like transporter family 16 153 IPR000620 GO:0016020
Viun2g01181 344 Pfam EamA-like transporter family 158 295 IPR000620 GO:0016020
Viun2g01181 344 SUPERFAMILY Multidrug resistance efflux transporter EmrE 216 300 - -
Viun2g01181 344 PANTHER WAT1-RELATED PROTEIN 13 306 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01181 Viun-Chr2 22635029 22637413 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01181 11 303 Nodulin-like Gene Family AT5G40240 38.154 2.60e-65 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01181 - - gmx:100792109 471.855