Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01179 ATGGCAAGATTGGGGAATGGAAGTGCCAAATTACTGCCATTTGTGGGAATGATGGTGGCTATGCTAACTCAAAGTGGAAGCATGGTGGTCATAAAATTTGCCATGATTGATGATATCAACAAATATGTAATGGTTGTCTACTCTTTTGCACTCTCCACTATCTTGCTTCTTCCCTTTGCCTTCTTTCTCCACAGGTCAGAACGTCCTCCTCTCACGTTCTCTTTACTCTGCAAATTCTTTCTTCTTGCATTCTTTGGGAGTGCAGCAACTACAATGGGTTATGTTGGAATAGAACTGAGCTCGCCGACACTTGGATCAGACCTTCTTAGCCTCGTTCCAGCTTTCACTTTTATACTTGCTCTCATTTTCAGGATGGAAGAAGTACATTGGAGGAACTCAAGCAGCCAAGCTAAAGTGTTAGGAACAATAACATCAATTGCAGGAGCATTTGTTGTGGTACTGTACAAGGGTCCAATCATCTTTAAGACACGTTCGTCCAACTTTTCTAACCAAATACTTCAATTTTCACAACAGCTAAATTGGATATTGGGAGGGATATTCTTTATTGCATATTCACTCTTTAATTCCATGTGGTACATATATCAGTGTGGAGTATTTGCCTTAATTGCTGTGAGGGATCCAACTGAATGGAAGCTCAACTTCGATATAGGCCTGGTTGGCGTTCTATATCAGGCAATAGTTGCAACAATGATATCTTACCTGCTATTCCAATGGTGCGTCCTTAAAGCTGGTCCTTTGTTTTGTTCTATGTTCAGTCCTGTGGCAATGATCTTCACCGTTTTCATGGGTGCAATCTTTCTTGGAGATGATTTAAGTCTTGGAAGTTTGATTGGTGCGGTTATAATCGTGGTTGGATTTTATGGTGTATTGTGGGGGAAATCGAAAGAGGAGAATGAGATTGCAGAAGGGGTTGAGGACTTCGACTCATCATTCCATGATGTTCCTTTGTTGCAAGACAGGAACAGGTTGAAGCTTCGAAGGTTTTATCACCCTTATATTTGGGAAAGTTTTGGATATTAA 1041 0.4083 MARLGNGSAKLLPFVGMMVAMLTQSGSMVVIKFAMIDDINKYVMVVYSFALSTILLLPFAFFLHRSERPPLTFSLLCKFFLLAFFGSAATTMGYVGIELSSPTLGSDLLSLVPAFTFILALIFRMEEVHWRNSSSQAKVLGTITSIAGAFVVVLYKGPIIFKTRSSNFSNQILQFSQQLNWILGGIFFIAYSLFNSMWYIYQCGVFALIAVRDPTEWKLNFDIGLVGVLYQAIVATMISYLLFQWCVLKAGPLFCSMFSPVAMIFTVFMGAIFLGDDLSLGSLIGAVIIVVGFYGVLWGKSKEENEIAEGVEDFDSSFHDVPLLQDRNRLKLRRFYHPYIWESFGY 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01179 346 PANTHER WAT1-RELATED PROTEIN 13 203 IPR030184 GO:0016020|GO:0022857
Viun2g01179 346 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
Viun2g01179 346 Pfam EamA-like transporter family 16 153 IPR000620 GO:0016020
Viun2g01179 346 Pfam EamA-like transporter family 182 297 IPR000620 GO:0016020
Viun2g01179 346 SUPERFAMILY Multidrug resistance efflux transporter EmrE 221 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01179 Viun-Chr2 22635029 22637414 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01179 11 305 Nodulin-like Gene Family AT5G40240 38.769 5.60e-66 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01179 - - gmx:100792109 470.7