Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01178 ATGGCAAGATTGGGGAATGGAAGTGCCAAATTACTGCCATTTGTGGGAATGATGGTGGCTATGCTAACTCAAAGTGGAAGCATGGTGGTCATAAAATTTGCCATGATTGATGATATCAACAAATATGTAATGGTTGTCTACTCTTTTGCACTCTCCACTATCTTGCTTCTTCCCTTTGCCTTCTTTCTCCACAGGTCAGAACGTCCTCCTCTCACGTTCTCTTTACTCTGCAAATTCTTTCTTCTTGCATTCTTTGGGAGTGCAGCAACTACAATGGGTTATGTTGGAATAGAACTGAGCTCGCCGACACTTGGATCAGACCTTCTTAGCCTCGTTCCAGCTTTCACTTTTATACTTGCTCTCATTTTCAGGATGGAAGAAGTACATTGGAGGAACTCAAGCAGCCAAGCTAAAGTGTTAGGAACAATAACATCAATTGCAGGAGCATTTGTTGTGCTAAATTGGATATTGGGAGGGATATTCTTTATTGCATATTCACTCTTTAATTCCATGTGGTACATATATCAGTGTGGAGTATTTGCCTTAATTGCTGTGAGGGATCCAACTGAATGGAAGCTCAACTTCGATATAGGCCTGGTTGGCGTTCTATATCAGGCAATAGTTGCAACAATGATATCTTACCTGCTATTCCAATGGTGCGTCCTTAAAGCTGGTCCTTTGTTTTGTTCTATGTTCAGTCCTGTGGCAATGATCTTCACCGTTTTCATGGGTGCAATCTTTCTTGGAGATGATTTAAGTCTTGGAAGTTTGATTGGTGCGGTTATAATCGTGGTTGGATTTTATGGTGTATTGTGGGGGAAATCGAAAGAGGAGAATGAGATTGCAGAAGGGGTTGAGGACTTCGACTCATCATTCCATGATGTTCCTTTGTTGCAAGACAGGAACAGGTTGAAGCTTCGAAGGTTTTATCACCCTTATATTTGGGAAAGTTTTGGATATTAA 963 0.4112 MARLGNGSAKLLPFVGMMVAMLTQSGSMVVIKFAMIDDINKYVMVVYSFALSTILLLPFAFFLHRSERPPLTFSLLCKFFLLAFFGSAATTMGYVGIELSSPTLGSDLLSLVPAFTFILALIFRMEEVHWRNSSSQAKVLGTITSIAGAFVVLNWILGGIFFIAYSLFNSMWYIYQCGVFALIAVRDPTEWKLNFDIGLVGVLYQAIVATMISYLLFQWCVLKAGPLFCSMFSPVAMIFTVFMGAIFLGDDLSLGSLIGAVIIVVGFYGVLWGKSKEENEIAEGVEDFDSSFHDVPLLQDRNRLKLRRFYHPYIWESFGY 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01178 320 Pfam EamA-like transporter family 16 153 IPR000620 GO:0016020
Viun2g01178 320 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 152 - -
Viun2g01178 320 SUPERFAMILY Multidrug resistance efflux transporter EmrE 195 276 - -
Viun2g01178 320 PANTHER WAT1-RELATED PROTEIN 13 282 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01178 Viun-Chr2 22635029 22637414 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01178 11 279 Nodulin-like Gene Family AT5G40240 35.692 2.65e-56 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01178 - - gmx:100792109 425.246