Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01177 ATGACGAGATCAGGGTATGGAAGTGGCAAATTACTGCCATTTATAGGAATGATGGTGGCTATGCTGGGTCAAAGTGGAAGCATGGTGGTCATCAAAGTTGCTATTAAGGATATCAACGAATATGTCATGGTTGTCTACACTTTTGCACTCTCTGCAATCTTGGTTCTTCCCTTCGCCGTCTTTCGCCACAGGATGTCACAACAGAGTCCTCCTCTCAATTTCGTTGCACTTTGCCGATTATTTTTGCTCGCTTCCTTTGGGAGTTTAGGAACTATACAGGCTTATGTTGGCATAGATCTGAGCTCGCCTGCACTTTTATCAGCCATTCTTAACCTCATGCCAGCTTTCACTTTTATACTTGCTCTCATCTTCAAGATGGAGCAAGTGCAATGGAGGAGTTCTAGCAGCCAAGCTAAAGTGGTAGGAACAATAGTATCAATTGCAGGAGCATTCGTTGTGGTACTGTACAAGGGTCCACTCATCTATAGGTCACATTCGGACAACTCTTCTAACCAAATGGTTCAACTTTCGTCAGAGCTAAATTGGATCTTGGGAGGGATAATGTGTGTTCTCGATGCACTCTTTACTTCATTGTGGTACATATATCAGGCTTCAGTAGGAGACACATACCCTACTATGGATGTCTCGGTGATTGTGTTCTTCCAATTCCTATTTTCAATGGTGCAGTGTGGAGCATTTGCCTTATTTGCTGTGAAGGATTTAACAGAATGGAAACTCAGGGTGGATATAGGGTTGATCGGGATTCTATATCAGGCAATAATTGCAACATTGCTGCGTTACCTCCTGGTCATGTGGTGCATAGTTAAAGCGGGCCCTTTGTTTTGTGCGTTGTTCCAACCTGTGGCAATCATTTTCACAGTTTGGATGGGTGCAATCTTTCTGGGAGATGATTTCAGTCTTGGAAGTTTGATTGGTGCGGTTATAATCGTGGTCGGGTTTTACGCTGTTCAGTGGGGAAAATCTAAAGAGGAGTACGAGATTGCGAAAGGCGTGGAGCACTTGGACACGGAATCACTGAGCCATGGTGCTCCTTTGTTACCAGATAGGAACACGTAG 1077 0.442 MTRSGYGSGKLLPFIGMMVAMLGQSGSMVVIKVAIKDINEYVMVVYTFALSAILVLPFAVFRHRMSQQSPPLNFVALCRLFLLASFGSLGTIQAYVGIDLSSPALLSAILNLMPAFTFILALIFKMEQVQWRSSSSQAKVVGTIVSIAGAFVVVLYKGPLIYRSHSDNSSNQMVQLSSELNWILGGIMCVLDALFTSLWYIYQASVGDTYPTMDVSVIVFFQFLFSMVQCGAFALFAVKDLTEWKLRVDIGLIGILYQAIIATLLRYLLVMWCIVKAGPLFCALFQPVAIIFTVWMGAIFLGDDFSLGSLIGAVIIVVGFYAVQWGKSKEEYEIAKGVEHLDTESLSHGAPLLPDRNT 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01177 358 SUPERFAMILY Multidrug resistance efflux transporter EmrE 244 329 - -
Viun2g01177 358 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 157 - -
Viun2g01177 358 Pfam EamA-like transporter family 185 322 IPR000620 GO:0016020
Viun2g01177 358 Pfam EamA-like transporter family 15 154 IPR000620 GO:0016020
Viun2g01177 358 PANTHER WAT1-RELATED PROTEIN 13 335 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01177 Viun-Chr2 22624809 22627478 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01177 6 331 Nodulin-like Gene Family AT5G40240 40.597 1.92e-73 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01177 - - gmx:100792109 464.536