Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01175 ATGGTGAGATGGGTGAACGGTGGAAGAGGAAAATTACTGCCATTTTTGGGGATGTTGTTGGCTATGCTAACTCAAAGTGGAAGCATGGTGGTCATAAAATTTGCCATGACTGATGGTATCAACAAATATGTTATGGTTGTTTATTCTATGGCTCTCTCCTCCTTCTTCCTTCTTCCCTTTGCCTTGTTTCAACACAGGTCAGAAGGTCCTCCTCTCACATTCTCTGCACTCTGTAGCTTCCTTTTGCTTGCTCTCTTTGTGAGTTCAGCACAGATAATGTCTTATATTGGCATAGAACTAAGCTCTCCAACTCTTGCATCAGCAATACTTAACCTTGTTCCAGCTTTCACTTTTGTACTTGCCCTCATTTTCAGGATGGAAAAAGTAGAGTGGAGAAATTTTAGCAGTGAAGCTAAAGTGTTAGGAACAGTAGTCTCAATTAGTGGAGCTTTTGTTGTAATACTTTACAAGGGTCCACCCATTGGGATGAAAGTTCAGTTTTCGACACAATTAAATTGGATCTTGGGAGGGATATGCTGCGTTGCCGATTCTTTATTTACTTCTATGTGGTACATATATCAGTTCTTGTTTTCAACCATTCCTTGTGGAATATTTGCTTTAATTTCTGTGAGAGACCCAACTGAATGGAAGCTCAGCTTCGACGCAGGGTTGAGTGTCGTTTTGTATCAGGCAATAGGTGCGACCATGCTACGTTACGTGCTATGCACGTGGTGTGTCCACAGGGAAGGACCTTTGTTTTGTGCTATGTTCAAGCCTGTGGGAATCATCTTCACAGCAATCATGAGTGCAATTTTTCTTGGGGAGAATCTTGGCCTTGGAAGTTTGATTGGTGGGGTTATAATCGTGGTAGGGTTTTATGCTGTTCTGTGGGGAAAATCCAGAGAGGAGAACAATGATGAGAAAAAGGTTGAAAACTTGGAATCATCGTGTCATAATCTTCCTTTATTACAAAATAGGGTATAA 984 0.4126 MVRWVNGGRGKLLPFLGMLLAMLTQSGSMVVIKFAMTDGINKYVMVVYSMALSSFFLLPFALFQHRSEGPPLTFSALCSFLLLALFVSSAQIMSYIGIELSSPTLASAILNLVPAFTFVLALIFRMEKVEWRNFSSEAKVLGTVVSISGAFVVILYKGPPIGMKVQFSTQLNWILGGICCVADSLFTSMWYIYQFLFSTIPCGIFALISVRDPTEWKLSFDAGLSVVLYQAIGATMLRYVLCTWCVHREGPLFCAMFKPVGIIFTAIMSAIFLGENLGLGSLIGGVIIVVGFYAVLWGKSREENNDEKKVENLESSCHNLPLLQNRV 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01175 327 Pfam EamA-like transporter family 15 154 IPR000620 GO:0016020
Viun2g01175 327 Pfam EamA-like transporter family 192 296 IPR000620 GO:0016020
Viun2g01175 327 SUPERFAMILY Multidrug resistance efflux transporter EmrE 194 302 - -
Viun2g01175 327 PANTHER WAT1-RELATED PROTEIN 14 307 IPR030184 GO:0016020|GO:0022857
Viun2g01175 327 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01175 Viun-Chr2 22605914 22609242 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01175 11 327 Nodulin-like Gene Family AT5G40240 36.676 7.61e-62 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01175 - - gmx:100816715 454.521