Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun2g01174 | ATGCCATTTGGTTTGGTCTCAGCCTGGAACAAGCGCCGGAGAAGCAAATCTCAAGAGCACACAGATCCCTGGGTTTACAAACCTGCACAGCTTTGGCAACTTGAAGATCAGACACCACGACCTACAAAAAGGCTACATGGATCATCTGTTTTCACACTCAAGGAGATGGAAGAGGCAACATGTTCATTCAGTGATGAGAATCTGCTTGGAAAAGGAGGATTCGGCAAAGTCTACCGAGGCACATTGCGGTCGGGAGAGGTTGTAGCAATCAAGAAAATGGAGTTGCCAGCAATTAAAGCAGCAGAGGGGGAGCGTGAGTTCCGAGTCGAAGTTGACATCTTAAGCAGACTTGACCACCCAAATCTTGTTTCTTTGATAGGCTACTGTGCTGATGGAAAGCATAGATTCCTAGTATATGAATATATGCGTAATGGAAACCTGCAAGATCATTTGAATGGAATTGGGGAAAGAAACATGGATTGGCCTCGAAGACTCCAAGTTGCACTGGGAGCTGCAAAAGGGCTTGCTTATCTTCATTCAAGTTCTGATGTTGGAATTCCAATTGTTCATAGGGATTTCAAATCGACCAATATTCTCTTAGATGACAACTTTGAAGCAAAGATATCTGATTTTGGTCTCGCCAAGTTAATGCCAGAAGGACAAGAAACACATGTGACTGCCAGAGTACTTGGTACCTTTGGCTATTTTGATCCTGAGTATACATCGACTGGAAAACTCACTCTACAAAGTGATGTTTATGCTTTTGGTGTTGTTCTTTTGGAGCTTTTGACTGGACGCCGGGCAGTGGATCTAAACCAAGGTCCCAACGATCAAAACCTTGTACTACAGGTGAGGAACATACTGAATGACCGCAAGAAGCTTCGTAAGGTGATAGATCCAGAGATGGCTCGAAATTCTTACACCATTCAGTCTATAGTCATGTTTGCCAATCTGGCATCAAGATGTGTTCGAACTGAGAGTAATGAGAGACCGTCAATGGCAGAATGTGTAAAAGAACTCCTAACGATTATCTATACAAATTCAAAAGGCTTGGGTATGGTTATGCATACTTTGAGAATGATCTAG | 1086 | 0.4309 | MPFGLVSAWNKRRRSKSQEHTDPWVYKPAQLWQLEDQTPRPTKRLHGSSVFTLKEMEEATCSFSDENLLGKGGFGKVYRGTLRSGEVVAIKKMELPAIKAAEGEREFRVEVDILSRLDHPNLVSLIGYCADGKHRFLVYEYMRNGNLQDHLNGIGERNMDWPRRLQVALGAAKGLAYLHSSSDVGIPIVHRDFKSTNILLDDNFEAKISDFGLAKLMPEGQETHVTARVLGTFGYFDPEYTSTGKLTLQSDVYAFGVVLLELLTGRRAVDLNQGPNDQNLVLQVRNILNDRKKLRKVIDPEMARNSYTIQSIVMFANLASRCVRTESNERPSMAECVKELLTIIYTNSKGLGMVMHTLRMI | 361 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun2g01174 | 361 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 188 | 200 | IPR008271 | GO:0004672|GO:0006468 | |
Viun2g01174 | 361 | CDD | STKc_IRAK | 69 | 340 | - | - | |
Viun2g01174 | 361 | Pfam | Protein kinase domain | 64 | 338 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun2g01174 | 361 | Gene3D | Phosphorylase Kinase; domain 1 | 31 | 141 | - | - | |
Viun2g01174 | 361 | Gene3D | Transferase(Phosphotransferase) domain 1 | 142 | 352 | - | - | |
Viun2g01174 | 361 | FunFam | receptor-like serine/threonine-protein kinase NCRK | 142 | 352 | - | - | |
Viun2g01174 | 361 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Viun2g01174 | 361 | ProSitePatterns | Protein kinases ATP-binding region signature. | 69 | 92 | IPR017441 | GO:0005524 | |
Viun2g01174 | 361 | FunFam | serine/threonine-protein kinase PBS1-like | 31 | 141 | - | - | |
Viun2g01174 | 361 | PIRSF | ILK | 32 | 351 | - | - | |
Viun2g01174 | 361 | ProSiteProfiles | Protein kinase domain profile. | 63 | 344 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Viun2g01174 | 361 | PANTHER | OS01G0750732 PROTEIN | 21 | 343 | - | - | |
Viun2g01174 | 361 | SUPERFAMILY | Protein kinase-like (PK-like) | 49 | 346 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun2g01174 | Viun-Chr2 | 22590135 | 22594813 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun2g01174 | 46 | 344 | Receptor kinase-like Gene Family | AT3G58690 | 47.697 | 6.43e-93 | 281 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIb | Viun2g01174 | Pkinase | 2.7e-50 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun2g01174 | - | - | gmx:100796654 | 707.597 |