Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01170 ATGGCAGTTCCATCGTCACTGTTTTCCCTCTCATTCCCCTTCGACCCTCAAATCCAAATCCAAAACCTCTCTTTCTCTCTCTCTCTGCCTTCGCACTTCTCTCTCTTCTCCTCCACCAAACCCCGTTTCCCCGCTTTCAAACTCTCCTCTTCCCACTCTTCCTCCTCCCCTCTCACCACCACCTTCCTCACCGACGACGACCTCCGCCGCCTCAACTCCCTCGAATCCTTCCTCTACCGCCGCGAACTCCCCTCCGGCTCCCTCTCCGTCCGCCTCATGCGCCCCCACGAGACCCGTTCCACCGTTCTCCTCCTCGCCCACTCCTTCGCCGAGTCCTTGCTCATTCCCGCCGCTTACGTCAACCTCCTCGCTTTCCTCATCAACCAGTACCTCATCCAACGCCTGACGCTCCTGCCCAACACCGCCACGCTCGTCGCTTTCTACACTCAAACACCATCGCCACCTACTGCTGATTCTAAAGAAGACGAGGAAGAACCACTACAAGAAGACGAAGGAGCGCCCTTGGCTGGAACTGTCGAGATCTGTTTCAACAAAAGAGGCGCCAATGCTTCCGTTCCCACGCCCACCCCTCCGAGGGATTCGCCCTACATTTGTAACATGGCCGTGGAAAAGTCTCTCAGGAGGAGGGGCATTGGCTGGCATCTTCTAAAGGCAAGTGAGGAATTAATTTCTCAGATGAGTTCCTCAAAAGAGGTTTACTTGCATTGCAGAATGATTGATGAAGCTCCATTTAAAATGTACACAAAAGCAGATTACAAAGTTGTAAAGACAGATAGTATTTTAGTCCTGCTGATGTTGCAGAGACGCAAGCACTTGATGTGCAAGGAACTCCCTCTTTCAAGTATGACTTCAGAATCAGATCTGTCAGAGTATGATGAACAAAAGACTATATGA 915 0.5169 MAVPSSLFSLSFPFDPQIQIQNLSFSLSLPSHFSLFSSTKPRFPAFKLSSSHSSSSPLTTTFLTDDDLRRLNSLESFLYRRELPSGSLSVRLMRPHETRSTVLLLAHSFAESLLIPAAYVNLLAFLINQYLIQRLTLLPNTATLVAFYTQTPSPPTADSKEDEEEPLQEDEGAPLAGTVEICFNKRGANASVPTPTPPRDSPYICNMAVEKSLRRRGIGWHLLKASEELISQMSSSKEVYLHCRMIDEAPFKMYTKADYKVVKTDSILVLLMLQRRKHLMCKELPLSSMTSESDLSEYDEQKTI 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01170 304 MobiDBLite consensus disorder prediction 152 171 - -
Viun2g01170 304 Pfam Acetyltransferase (GNAT) family 171 257 IPR000182 GO:0016747
Viun2g01170 304 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 90 270 IPR016181 -
Viun2g01170 304 Gene3D - 116 302 - -
Viun2g01170 304 CDD NAT_SF 197 242 - -
Viun2g01170 304 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 23 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01170 Viun-Chr2 22587937 22595432 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Viun2g01170 Acetyltransf_1 1.4e-05 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01170 - - pvu:PHAVU_002G073400g 357.451