Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01149 ATGGCTGAAGCAATTCTTGGAGTTGTGCTTGAAAAGTTGACCTCTCTTGCTGTAGAAGAGCTGAGATCATTTATGGGTTTCAATACAGACTTGGAAAAGCTTCGCGTCATGCTCACTTCAATCGAGGCTATCCTTGATGATGCTGCAGAGAAACAGTTCTCAAGCCAAAGAGTAAAGTATTGGCTGGAGATGCTAAAAGATGCATCTTATGAGCTGAATGACATCTTAGACGAGTGTGCTGAATTGACCTTGGAGTACCAAGGTATCAAGTGTGGTTCATATCATGAGGTATGTTCTTGCTTATCCTATTTTCGTCCCAAGCATGCTGCCTTCCATTACACCATTGCTAAGAGAATGAAAAGTATATGTGAGAGATTAGATACAATTGCGGAAGCAAGACACATGTTTCAGTTAACGGCGAAGCCTCCTAGGAGTGGTGGAGTCTATGAAAGACTCCAAACCACCTCAGTCATAGTTGAAAGTCGAGTCTACGGGAGAGAAGAAGATGAACAAAATATTGTAGACTTTTTAATGGCTAATGCTGATGTTCATACTTCTCGTTCTAATAACTTATCAGTCTATCCAATTGTAGGACTAGGCGGACTTGGAAAGACAACACTTGCCCGACTCATTTTCAATCATGTAAGTGTAGTCAACCACTTTGATGCAAGAGTTTGGATATGTGTTACTGAAGATTTTGATTTAAACAAAATAACTAAAGCTATCATTGGATCATTGTCTCTTGAGATATGTGAAGATTTGGAACTAGAGTCACTACTAACAAAAGTTCAAGATCTGCTCCAAAATAAAAGGTATCTACTTGTTTTGGACGACGTGTGTGATTATCAACAAGAGAAATGGTTGATGTTGAAATCGGTTTTGGCTTGTGGAGCGATGGGTGCCTCCATTTTGATCACTACTCGTCTTTTAAGGGTTGCTGCAATGATGGGAACAGTGTCACCTCATGAATTATCTTATCTGTCTGACAACGATTGTTGGAAATTGTTTAAAGAACAAGCTTTTCAAGCAGGCGAAATAGAACAGGAGGAGCTTGTAAACATTGGAATGGACATAGTAAAGAAATGTGGGGGAGTGCCGCTTGCAGCAAAAGTGCTAGGAGCTTTCCTACGTTTCAATAGGGAAGAAAGTACGTGGACCAATGTTAAGAATAGCGACACATGGAAATCATCACAGGGAGAAAACTCTATAATGCCTGCCCTGATATTAAGTTACTCAAACTTACCACACAAAGTCAGACAATGTCTTGTTTATTGTGCAATCTTTCCCAAAGATGAAATAATTAGGAAGCAAGATTTAATTGAACATTGGATGGCGAATGGATTCATTCCACCCAATGAAACATTAGATGTTGGTGATAGTATGTGGAATGAATTATATTGGAGATCATTTTTTCAGGATATTGAGACAGATGAGTTTAGCCACGTTACAAGTTTCAAGATACATAACATCGTTCATGATCTTCTAAAGTTTGCTGCAGAAGAGGTTTGTTGCATTACAAATGACAATGATGTAACCGTGCCTGAGAGAATCCACCATATCTCGGAGCATAGCTGGAGGAGTAAATTAGATTCAGCCCAGTTTCGGTTCGAATCTCTGAGGACCTATTTATTGCCACCACAAAGGTACAAAACAGGGCAACTTTCTCCCCAGGTATTGAAATGTTATAATTTACGGGTGCTTCAATATGAACCAACGGAAACTTTGTCGTCTTCAATTAGTCGTTTAAAACATCTAAGGTACTTGAATGTTTCTGGGGGTGACTTCGTAACTATTCCAAAATCTCTATGTAGATTGTGGAATTTGCAAATATTGAAGTTAGACCATTGTCATCGTCTCCAAAAGTTGCCTAAAAATTTGATAGGTTTGAAAGCTCTACAAAAGCTATCTTTGAATGGCTGCAGCTCACTTTCAAGCTTACCACGTCAAATGGGGAAGTTGACTTCCCTAAGGAATTTAAGCATGTACATAGTTTGCGAGAAAAAAGGGTTTCTTTTGGCAGAATTGGGACCACTCAAGCTTAAAGGAGATCTCGACATCAAGCATATGGAGAAAGTGAGAAGTGTTGAAGATGCCAAAGAGGCCAAGATGTCAGAAAAGCAACTAAATCGGTTGTCATTGTCATGGGACAACAATGAAGCGACTGAATTGCAAGAAAATGTTGAAGAAATTCTTCAAGTGCTTGAACCCAGTACCAACCAACTTGCGAGTTTGAGTGTGGTAGGATATAAAGGGGCCTGCTTCCCACAATGGATGTCTAGTTCTTTTCTCAAATATCTAGAACTGGAGGATTGTAAAATGTGTTCAAAACTTCCACAGTTGGGGAAATTACGTTTTTTGAAGAGTCTGAGTATATCAAAAATGACTCCTGTAGAGTACCTATACGAGGAGGATTCCTATGATGGTGAAGCAGTTTTCATTGCTCTAGAATTTCTGTTCCTAAAGGAGCTCTCAAACCTAAAAAGATTACTGAAGAGGGAGGACGGGGAAAACATGTTCCCATTACTTAACAAACTTGAAATTGCTGAATGTCCTAACTTGTTGGGTTTGCCCAGTCTTCCATCTATCAGGGATCTACACATACAGGGGAAGTGCAACCAACATTTACTAACTTCAGTTAAGAAACTAAGTAGTCTTCAAGACTTGTGGTTGGAAGATAACGAAGAGTTAAGATTTTTTCCAGATGGGATGTTCCAAGGGCTTACTTCTCTGAAAGAACTATATTTTCACAGGCTCTTCAAACTCGAGATATTCCCAACCAAACTGCCAGATTCTCTTGAGAAATTAGAATTTGTGGGGTGTCATAAGTTCGTGTCTGCAGGTTTGCATGAGGCTTTACAAAATGTGACTGCACTGCACTCCTTAAAATTTGAGCATCTTCCGAACCTAGCTTCTTTGCCTGACTGCTTTCAAAAACTTGCGTTGCTTCGCGAATTGACTCTGTATAACTGTTCAAAATTGAAGTGCCTTCCAGCCAGCCTAAAGTTTTGCGCTCTGAAAAGATTGGATATTCAAGGTTGCCCGGAGTTAGAGAAACGATGTCAAGAATACACGGGAGAGGACTGGCCAATCATATCTACCATCCCCAATATCAGAGTTATTCCAATGCGGAGATGA 3135 0.3978 MAEAILGVVLEKLTSLAVEELRSFMGFNTDLEKLRVMLTSIEAILDDAAEKQFSSQRVKYWLEMLKDASYELNDILDECAELTLEYQGIKCGSYHEVCSCLSYFRPKHAAFHYTIAKRMKSICERLDTIAEARHMFQLTAKPPRSGGVYERLQTTSVIVESRVYGREEDEQNIVDFLMANADVHTSRSNNLSVYPIVGLGGLGKTTLARLIFNHVSVVNHFDARVWICVTEDFDLNKITKAIIGSLSLEICEDLELESLLTKVQDLLQNKRYLLVLDDVCDYQQEKWLMLKSVLACGAMGASILITTRLLRVAAMMGTVSPHELSYLSDNDCWKLFKEQAFQAGEIEQEELVNIGMDIVKKCGGVPLAAKVLGAFLRFNREESTWTNVKNSDTWKSSQGENSIMPALILSYSNLPHKVRQCLVYCAIFPKDEIIRKQDLIEHWMANGFIPPNETLDVGDSMWNELYWRSFFQDIETDEFSHVTSFKIHNIVHDLLKFAAEEVCCITNDNDVTVPERIHHISEHSWRSKLDSAQFRFESLRTYLLPPQRYKTGQLSPQVLKCYNLRVLQYEPTETLSSSISRLKHLRYLNVSGGDFVTIPKSLCRLWNLQILKLDHCHRLQKLPKNLIGLKALQKLSLNGCSSLSSLPRQMGKLTSLRNLSMYIVCEKKGFLLAELGPLKLKGDLDIKHMEKVRSVEDAKEAKMSEKQLNRLSLSWDNNEATELQENVEEILQVLEPSTNQLASLSVVGYKGACFPQWMSSSFLKYLELEDCKMCSKLPQLGKLRFLKSLSISKMTPVEYLYEEDSYDGEAVFIALEFLFLKELSNLKRLLKREDGENMFPLLNKLEIAECPNLLGLPSLPSIRDLHIQGKCNQHLLTSVKKLSSLQDLWLEDNEELRFFPDGMFQGLTSLKELYFHRLFKLEIFPTKLPDSLEKLEFVGCHKFVSAGLHEALQNVTALHSLKFEHLPNLASLPDCFQKLALLRELTLYNCSKLKCLPASLKFCALKRLDIQGCPELEKRCQEYTGEDWPIISTIPNIRVIPMRR 1044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01149 1044 Coils Coil 65 85 - -
Viun2g01149 1044 PRINTS Disease resistance protein signature 193 208 - -
Viun2g01149 1044 PRINTS Disease resistance protein signature 266 280 - -
Viun2g01149 1044 PRINTS Disease resistance protein signature 627 643 - -
Viun2g01149 1044 PRINTS Disease resistance protein signature 362 376 - -
Viun2g01149 1044 PANTHER DISEASE RESISTANCE PROTEIN RP 62 850 IPR044974 GO:0006952
Viun2g01149 1044 SMART LRR_typ_2 629 653 IPR003591 -
Viun2g01149 1044 SMART LRR_typ_2 882 906 IPR003591 -
Viun2g01149 1044 SMART LRR_typ_2 582 605 IPR003591 -
Viun2g01149 1044 Gene3D Ribonuclease Inhibitor 529 679 IPR032675 -
Viun2g01149 1044 Gene3D Ribonuclease Inhibitor 684 859 IPR032675 -
Viun2g01149 1044 Gene3D Ribonuclease Inhibitor 860 1024 IPR032675 -
Viun2g01149 1044 Pfam Rx N-terminal domain 6 81 IPR041118 -
Viun2g01149 1044 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 425 IPR027417 -
Viun2g01149 1044 Gene3D - 405 497 IPR036388 -
Viun2g01149 1044 Pfam NB-ARC domain 188 413 IPR002182 GO:0043531
Viun2g01149 1044 SUPERFAMILY L domain-like 471 1029 - -
Viun2g01149 1044 CDD RX-CC_like 2 131 IPR038005 -
Viun2g01149 1044 FunFam Probable disease resistance protein At1g63360 411 496 - -
Viun2g01149 1044 Coils Coil 31 51 - -
Viun2g01149 1044 Gene3D - 147 320 IPR027417 -
Viun2g01149 1044 Gene3D - 5 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01149 Viun-Chr2 22403677 22408896 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01149 196 800 WRKY Transcription Factor Family AT5G45050 23.440 2.85e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01149 - - vun:114173622 2090.46