Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01128 ATGGACACAGACGCCGTCGTTTCCTTCGATCATGTCTCGCCGGAGGATTCTCACGAGGTTCATGTTTTGGCCGTCGACGACAGCCTCGTTGATCGAAAGGTCATTGAACGCTTGCTCAAAATCTCAGCTTGTAAAGTTACAGCTGTGGACAGTGGAATCAGAGCACTGCAATTTCTGGGGTTGGACGAGCAGAGAAGGACCTCTGAATCTGAGGGTTTTGTCCCGAGTTTGAAGGTGGATCTAATTATCACAGACTACTGCATGCCCGAGATGACAGGTTATGAATTGCTCAAGAAAATAAAGGAATCGTCCATGTTCAGGGAAATTCCGGTAGTGATTATGTCTTCCGAAAACGTTTTGCCTCGCATAGACAGATGCTTGGAGGAAGGTGCAGAGGATTTCATAGTGAAACCGGTGAAATTATCCGACGTGAAACGGTTGAAGGGATACATGACAACAACGAGAGAGGTTAAGGTTGGAAGCCACGACAGAGGAAGCGGTGTGGTCGATGATGTTGGTGTTGAGATTGAGATTAACAACAAACGAAAGCTGGTGGAAGAAGAAGAGGAAGAGACCTCTGACATGTCATCATCATCATCGCCACCGTCCGTTTCTACACTTTCATCATCACCGTCCGTTTCTTCACCGTCATCGTCTCCCACATCTTCACCAATCAGACGGCTTAAAATGAGCAGCAGCAGCAGCAGCAGCAGCGATTGA 720 0.4764 MDTDAVVSFDHVSPEDSHEVHVLAVDDSLVDRKVIERLLKISACKVTAVDSGIRALQFLGLDEQRRTSESEGFVPSLKVDLIITDYCMPEMTGYELLKKIKESSMFREIPVVIMSSENVLPRIDRCLEEGAEDFIVKPVKLSDVKRLKGYMTTTREVKVGSHDRGSGVVDDVGVEIEINNKRKLVEEEEEETSDMSSSSSPPSVSTLSSSPSVSSPSSSPTSSPIRRLKMSSSSSSSSD 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01128 239 MobiDBLite consensus disorder prediction 195 239 - -
Viun2g01128 239 Gene3D - 20 204 - -
Viun2g01128 239 Pfam Response regulator receiver domain 22 144 IPR001789 GO:0000160
Viun2g01128 239 SUPERFAMILY CheY-like 20 146 IPR011006 -
Viun2g01128 239 SMART REC_2 20 151 IPR001789 GO:0000160
Viun2g01128 239 ProSiteProfiles Response regulatory domain profile. 21 152 IPR001789 GO:0000160
Viun2g01128 239 PANTHER TWO-COMPONENT RESPONSE REGULATOR 20 197 IPR045279 GO:0009736
Viun2g01128 239 CDD REC_typeA_ARR 22 147 - -
Viun2g01128 239 MobiDBLite consensus disorder prediction 180 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01128 Viun-Chr2 22105894 22107525 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01128 13 232 Response Regulator Gene Family AT1G10470 54.150 8.77e-72 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Viun2g01128 Response_reg 5.8e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01128 K14492 - gmx:100787696 303.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g01128 2 22105894 22107525 Viun2g01128 2 22105894 22107525 ECH