Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01127 ATGATGTTTGTTCTTGTTGTGAGCCTTGTTGTTTTGCAAGGCTTTGTGATACCAACCTGCTATTGTGAGAACAATAATCCTCAGAATATTGAAACATTTTATCCAATCCAAACTTCAGAACCACCCCTCCCAATCCAACCTTCTCAGCCACAGGCATCACCACCATCATCTGCAACAAAAGCCTCTTCATCAAACAGTAAGGTGGGAACAGCAGTGGCTGCCACTGCAGCAAGCACTCTTGTTGTTTCTGGTTTGGTTTTCTTCTTGGTTAGAAGGTGCTTCAGAACAAGGAAGAGAAAGGAGGCAACAAAGAACACTGCTTCTGCTGTAGAAAGGCATCATGTTGCACCTCAGGTGGAGGTGTTTCAGAGAATGGAAGGAAACGTGAAGGGACTGATCGTTGATGAGGATGGTTTGGATGTGGTTTATTGGAGAAAACTTGAAGGTAAGAAGATACCACAAAAGGATTTCCAAAGGGAGGTGTTGGATGGTCACAAAGGTAAAGAAGATGATGATCATGAGGGAAATCCAGGGAAGAGAAATGAATCCATTCAAGAAACTCCTCTTCTTAGAGACAAATCTTCAACTTCTCACATGAACATATTTCTTCCAGAAGAGTCCTACACAATCATGAGAATTCCACCTCCTGCTCCTCCTCCCACTGTTCCTTCATCACTTGGAGGCTCTCCTACACAACCATCTTCTCCTTCCTTTACCCCTTCATCACCAAAACCAATCTCCACTTTTTTCTCATCAATTCCAAACATTACAAATTCTGCAACACCATTGGCCCCTCCAAAAGTACCTGATAAAAATAATGAAGCTCCAATACCAGCACCAGCACCTCCTCCTCCTCCTCCAATTCCAAAAAACATGAACTCTGCTGTAGCAGCTCCTCCTCCTCCACCTCCTCCTCCAATCCCTCCTAGAAAGAGTCCAGCACCACCACCTCCTCCGCCAAAGGCAAATGGTTTGAAGTCTTCATCAAAACCGCCACCGAATCCTATTGAAAGAACAACAGGTACCACAAGTAAGCAAGGAGAAACTTCTCCAGAGGTGAAACTTAAGCCATTACATTGGGATAAGGTGAATACCAACCTTGATCACTCTATGGTGTGGGACAAAATGGACCGTGGTTCTTTCAGGGTTGATGATGATCTTATGGAAGCTCTCTTCGGGGTAGTCGCCACCAACCGGAATGATAATGCCCCCAAAGAAAATAACTCAACGAGTTCTAGCAAGGATGCTTTGGCTCCATCCTCAAATGCCTTCCTTCTTGACCCAAGAAAATCACAAAACATTGCAATTGTTTTGAAATCTCTGACAGTTTCTCGTAAAGAGATTATCGAAGCACTCATTGATGGTCAAGGCCTTAATATAGAAACCATTGAAAAGCTTGGTAGAGTAGCCCCAACAGAAGAAGAGCAATCACTTGTACTTGCCTATGAAGGAGACCCTTCAAAACTTGCTGAAGCCGAAACTTTCCTACGTCACATCCTCAAAGCTGTTCCTTCAGCTTTTAAGCGATTGAATGCCTTGCTATTCAGGTTGAATTATGACTCCGAGATTCTAGAAATCAAGGAGTTTCTGCAGAACCTTGAGATGGGGTGCAAGGAGCTTCGAAACCACGGAATCTTTGTGAAACTTCTTGAAGCAGTGCTTAAGGCTGGAAATCGCATGAATGCAGGAACTCAGAGGGGTAATGCTCAAGCTTTCAACATGGCTTCTCTAAGAAAGCTCTCCGATGTCAAGAGCACTGATGGAAAAACCACATTGCTTCACTTTGTGGTTGAAGAAGTTGTTCGTTCTGAAGGAAAACGTGCTGTTCTCAACCGCAGCCACAGTTTGAGTCGTAGTAGCAGCAGGAACAGTAACTACAGTGATGACTCTCAAAACTCTTCTGCTTCAAATGAACAAAGACAGAAGGAATACATAACACTAGGATTGCCAGTTGTGGGAGGGATCAGTTCTGAGTTTTCCAACGTGAAGAAAGCTGCCGTTACAGATTACAACGCTTTTGTTGGTTCAATCTCAGCACTCTCGGCCAGGATTGTTCAGATTAGAGAACTTGTTTCCCAGTGTGGAAATGACAAGGGAGGGAACTTTGTGAGAGAAATGAACCGTTTTCTTGAAAATGCTGAGGAAGAATTGAGATTAGTGAGGGAAGAGCAAACAAGGGTGATGCAAATTGTGAAAAAAACAACAGATTATTATCAAGGAGGAGCTTCAAAAGATAGTGCAGAACACCCTCTTTATCTATTCGTCATAGTTAAAGATTTTCTGGGAATGGTTGATCAAGCATGCATTGAGATTGCTCGTAACATGCAGAAGAGGAAGACGCCTAAGGTAAATTAA 2355 0.4327 MMFVLVVSLVVLQGFVIPTCYCENNNPQNIETFYPIQTSEPPLPIQPSQPQASPPSSATKASSSNSKVGTAVAATAASTLVVSGLVFFLVRRCFRTRKRKEATKNTASAVERHHVAPQVEVFQRMEGNVKGLIVDEDGLDVVYWRKLEGKKIPQKDFQREVLDGHKGKEDDDHEGNPGKRNESIQETPLLRDKSSTSHMNIFLPEESYTIMRIPPPAPPPTVPSSLGGSPTQPSSPSFTPSSPKPISTFFSSIPNITNSATPLAPPKVPDKNNEAPIPAPAPPPPPPIPKNMNSAVAAPPPPPPPPIPPRKSPAPPPPPPKANGLKSSSKPPPNPIERTTGTTSKQGETSPEVKLKPLHWDKVNTNLDHSMVWDKMDRGSFRVDDDLMEALFGVVATNRNDNAPKENNSTSSSKDALAPSSNAFLLDPRKSQNIAIVLKSLTVSRKEIIEALIDGQGLNIETIEKLGRVAPTEEEQSLVLAYEGDPSKLAEAETFLRHILKAVPSAFKRLNALLFRLNYDSEILEIKEFLQNLEMGCKELRNHGIFVKLLEAVLKAGNRMNAGTQRGNAQAFNMASLRKLSDVKSTDGKTTLLHFVVEEVVRSEGKRAVLNRSHSLSRSSSRNSNYSDDSQNSSASNEQRQKEYITLGLPVVGGISSEFSNVKKAAVTDYNAFVGSISALSARIVQIRELVSQCGNDKGGNFVREMNRFLENAEEELRLVREEQTRVMQIVKKTTDYYQGGASKDSAEHPLYLFVIVKDFLGMVDQACIEIARNMQKRKTPKVN 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01127 784 PRINTS Proline rich extensin signature 283 299 - -
Viun2g01127 784 PRINTS Proline rich extensin signature 233 245 - -
Viun2g01127 784 PRINTS Proline rich extensin signature 300 317 - -
Viun2g01127 784 PRINTS Proline rich extensin signature 211 227 - -
Viun2g01127 784 PRINTS Proline rich extensin signature 262 283 - -
Viun2g01127 784 SUPERFAMILY Formin homology 2 domain (FH2 domain) 358 779 - -
Viun2g01127 784 MobiDBLite consensus disorder prediction 210 357 - -
Viun2g01127 784 Pfam Formin Homology 2 Domain 349 764 IPR015425 -
Viun2g01127 784 Coils Coil 703 730 - -
Viun2g01127 784 MobiDBLite consensus disorder prediction 611 639 - -
Viun2g01127 784 MobiDBLite consensus disorder prediction 211 226 - -
Viun2g01127 784 MobiDBLite consensus disorder prediction 158 180 - -
Viun2g01127 784 MobiDBLite consensus disorder prediction 227 262 - -
Viun2g01127 784 MobiDBLite consensus disorder prediction 612 639 - -
Viun2g01127 784 MobiDBLite consensus disorder prediction 327 350 - -
Viun2g01127 784 Gene3D Formin, FH2 domain 365 783 IPR042201 -
Viun2g01127 784 ProSiteProfiles Formin homology-2 (FH2) domain profile. 345 784 IPR015425 -
Viun2g01127 784 PANTHER FORMIN-RELATED 39 775 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Viun2g01127 784 MobiDBLite consensus disorder prediction 269 326 - -
Viun2g01127 784 SMART it6_source 345 779 IPR015425 -
Viun2g01127 784 MobiDBLite consensus disorder prediction 41 63 - -
Viun2g01127 784 MobiDBLite consensus disorder prediction 158 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01127 Viun-Chr2 22091318 22094309 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01127 303 780 FH2 protein (formin) Gene Family AT1G70140 56.042 8.49e-176 522
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g01127 2 22091318 22094309 Viun2g01127 2 22091318 22094309 ECH