Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01108 ATGCCGCCGGAAAGTGACGTCACCGTCTCCTCTTACCGGCTCCGCTGGGACGTCTTTCTCAGCTTCCGGGGCACCGACACGGGCCACACCTTCACCATGCGCCTTTACCACGCTCTCCACGGGCGTGGCGTTCGCGTCTTCCGAAAAGAAGATGGGTTGGAGCGCCGCGACGAGATCCAGAAGAAGCTTCTAGAAGCCGTGGAAGACTCTGCCGCCGCCGTCGTCGTTATCTCTTCCGATTACGCGTCCTCGCACTGGTGCCTGGAAGAGCTCGCAAAGATTTGTGACGTTGGGAGGCTGATCCTCCCGGTTTTCTACTGGGTGGACCCTTCGCACGTGCGAAAGCAAGAGGGTCCCTTCGAGGATTGGTTCTTGCGGCATGCAGAGAGGTTTCCGAAAGAGAGGGTTGAGCAGTGGAAGAATGCGATGAAGAAAGTGGGTGGACTTGCTGGTTTTGTTTTGGATGAGAAAAGTGACAAGAGTGATGAACTCATTCAGATTTTGGTGCAAAATCTTATGAAGCAGCTGAGGAACACACCACTGAGTGTGGCTCCATTCACAGTAGGTCTCGAAGATAGAGTTGAAGTGTTGAAAAACCTGTTAGACTTAAAATCCAGCGACGTAAGGGTTTTGGGGTTGTACGGAATGGGTGGAGTTGGTAAGACAACGTTAGCCAAGAGCCTCTTCAACAACCTTGTTGTTCATAATTTTGAGCGACGGAGTTTCATTCCAAATGTCAGATCACAGGTCTCCAAACACCACGGTTTGGTTTCTCTTCAAAACAAAATCCGTGGTGATCTTTGTGGGAGAAAAGAGGATCTGATAAACGATATCAGCGACGGCATTTCTGCTATACAAAAAATAGTGCAAGAGAATCGAGTTTTGTTGATCCTAGATGATGTTGACGATGTGGAGCAGCTTAACTTTTTGATGGGTAAGAGGGAATGGTTTTACAAGGGAAGTCGTGTCGTGATAACCACAAGGGATAAAGAAATCTTGCACGAGAGTTATGTTGATGTTGATTATGAGGTGAAGGAATTGGAATTCTCTGAAGCAATGGAACTGTTCTGCTTCCATGCAATCAGAAGAAAGGAACCTGCAGAGGGTTTTTTGGATGTTTCAAAACAAATTGTGGAGAAGACAGGAGGGTTGCCTTTGGCTTTGGAAGTTTTTGGGTCTTATCTGTTTGATAAAAGGACCAAGAGGGAATGGAAAGACGCTTTGGAGAAGCTGAAGCAGATTCGTCCTGCATGTCTTCAAGATGTGCTGAAGATAAGTTTTGATGCGTTGGATGAAGAAGAACAGTGTATATTCCTTGACATGGCTTGTTTGTTTGTGCAAATGGAAATGAAGAGAGATGATGTGGTTGACATATTGAATGGATGTGATTTTAGCGGAGAGATTGCAGTGGCTGTGCTCACTGCAAGATGTCTGATTAAGATCATTGGTGATGGAAAAGTGTGGATGCATGATCAAGTTAGAGACATGGGAAGGCAAATTGTTCGTAGTGAAAGCCTTACTGATCCTGGTCTACGAAGCAGGCTCTGGGATCGTGATGAAATCTTGACTGTGTTGAAGAATATGAAGGGAACGAGAAATGTTCAAGGAATTGTCCTAGATTGCGTGAAGAGAAGAATGTCCATTCCCAGAGATAGTACAGCAGAGGAAATTACATGGGAAAATTTTCGACGCAAGCCCAGTTGCAAATCTGCATTCGAGTATATTAAAGAGAGGTATAAAAAGTACGTAGAGGATAGAAAAGAGAGAGCAAAAGAGGTTATCCTTCAGCCCAAGCACTTTCAACCAATGGTTTCCTTAAGAATGCTTCAAATTAATTATTCCAGATTGGAAGGACAATTTAGATTTCTTCCTCCAAAACTCAAATGGTTACAATGGAAACAGTGTCCATTAAGGTATATGCCTTCTAGCTATAATCCATTAGAACTTGCAGTCATGGATCTCTCTGAAAGTCTGATTGAAACCTTGTGGAAGGGACGCAGTAACAAGGTGGCTGAGCACTTGATGGTTTTAAACCTCTCCAGTTGCCACCGTTTGACAGCAACTCCTGATTTATCTGGGTATCTGTCTCTTAAAAAACTTAATTTGGAAGAATGTTCTCACTTAACTAGGATTCATGAATCACTGGGGAATCTAAATTCCTTAGTTCATCTTAACTTGCGCCTCTGCTATAACCTCATAGAACTACCAGGTGAAGTCTCTGGGCTGAAACAACTCGAGGACCTCGTTCTTTCCGGCTGCTGGAAACTGAAAGCATTACCAAAAGACTTGAGCTGCATGGTTTCTTTAAAACAACTACTTCTTGATAGCACTTCTATAACAGAGCTTCCCGAATCCATCTTCCATCTCACAAAACTTGAAAAGCTGAGTGCAAATGGATGCCACTCACTGAAGAGGTTACCTACCTGCACTGGGAAACTTTGCTCCCTGCAAGAATTATCACTCAACCATACAGCATTGGAGGAATTGCCAGATTCAGTTGGTTCTTTGGAAAAACTTGAGATGCTTAGTTTGATGGGGTGTAAGTCACTCTCAGTGATTCCTAACTCTACTGGGAAACTAATTTCAATGACTCAATTGTTTTTGAATGGCAGTGGAATCAAAGAATTGCCTGCTTCTATTGGTTCTTTGTCATATTTAAGGAAGCTGTCTGTTGGAGACTGTACTTCTCTTGACAAATTTCCTGTCTCAATGGAATTATTAGTTTCTATTGTTGAACTTAAGTTAGATGGCACAAAAGTTTCCAATTTTCCAGATGAAATATTTGTGGGCATGAAAATGCTAGAGAAGCTCGAGATGGGAAAAGTTCAGCTTCTCAAGTTTGTACCAGAATCATTTGGGTGCCTCTCAGCTCTTACCATTTTGGACATGCATGAGTCAAACATTACTGAATTGCCAGAATCAATAGGAATGTTGGAAAATCTTATTGGACTGAGGTTAGACAAGTGCAAACAGCTCCAAAGGCTTCCAAACTCCATTGGAAATTTGAAATCTTTGCAATGGCTAATGATGAAGGAAACAGAAGTTACACGATTACCAGATAGCTTTGGCATGCTCAGAAGCCTGGTTGAACTAGACATGAAAAGAATGCCCTATCTTAATAATAATGGGGCTGGAACAAACATGTCCACAGTGACAATAATTCCTAACATCCAAGAACAACCTAATTCAGAGGCAATCCTATCTTCTTTTTGCAATCTAACCTTTCTGGAAAAGCTAAATGCTCATGGATGGGGAATATATGGAAAAATTCCAGATGAGTTTGAAAAACTGTCATCACTAGAAACTTTAAGTTTAGGTCACAACAACATTTGCAGTCTTCCAGCGAACATGATGAGTCTCTCCTATCTTAAAAAACTTTTGTTATCAAATTGCAGAGAGCTCATGTTTCTGCCTTCTCTTCCCTCTAGCCTTGAAGAGCTAAATCTGGAAAACTGTGTTGCAGTGCAGTACATACATGATATTTCAAACTTGGAGCGATTAGAAGAGTTCAACCTTACAAATTGTGAAAAGGTGGTCGATGTCCCAGGTCTTGAACATTTGAAGTCCTTAAGAAGGTTGTACATGAGTGGTTGCATTGGATGCTCCCTTGCCGTAAAGAGAAGATTTTCCAAGGTTGTACTTAAGAAATTAGAGATTTTGATTATGCCTGGAAGCAGGGTCCCGGATTGGTTTACAGCAGAACCGGTAGTGTTTTCCAAGAGAAGAAATAGGGAGCTGAAAGGTGTTATTTTTTTCGGTGTTCTCTCTTTCAAGAACATACCTGAAAACCAAAGGGAAAGACTGCAGTTAGAAGATGTTCAAGGAAAAATCTTTAATTTGAGCAGTGAGGTATTTAGCACAACGTTTCGCCTGCTAGGAGTACCTGGGACAAATGAAGACCACATATTTTTGCGCAGATTTGGTGCTCGAACTCCGTTAGTCTTTCAGTTGAAAGATAGGTATACCTTACATTTGCAAATGCGAAACCCTCCTCGTGTTAATGGGTTGGAGCTTAATAACTGCAGAATTCATTTAGTTTATTATGGTGATGATGATTATGAGGGAGACGAAGGATCACTAGAAGAAAGTCAATTCTCTGTTTCACAAAAATTAGCCAAGTTCTTCAACTTTGCTGCAGAGGACCATGCATGCATCTGA 4158 0.4216 MPPESDVTVSSYRLRWDVFLSFRGTDTGHTFTMRLYHALHGRGVRVFRKEDGLERRDEIQKKLLEAVEDSAAAVVVISSDYASSHWCLEELAKICDVGRLILPVFYWVDPSHVRKQEGPFEDWFLRHAERFPKERVEQWKNAMKKVGGLAGFVLDEKSDKSDELIQILVQNLMKQLRNTPLSVAPFTVGLEDRVEVLKNLLDLKSSDVRVLGLYGMGGVGKTTLAKSLFNNLVVHNFERRSFIPNVRSQVSKHHGLVSLQNKIRGDLCGRKEDLINDISDGISAIQKIVQENRVLLILDDVDDVEQLNFLMGKREWFYKGSRVVITTRDKEILHESYVDVDYEVKELEFSEAMELFCFHAIRRKEPAEGFLDVSKQIVEKTGGLPLALEVFGSYLFDKRTKREWKDALEKLKQIRPACLQDVLKISFDALDEEEQCIFLDMACLFVQMEMKRDDVVDILNGCDFSGEIAVAVLTARCLIKIIGDGKVWMHDQVRDMGRQIVRSESLTDPGLRSRLWDRDEILTVLKNMKGTRNVQGIVLDCVKRRMSIPRDSTAEEITWENFRRKPSCKSAFEYIKERYKKYVEDRKERAKEVILQPKHFQPMVSLRMLQINYSRLEGQFRFLPPKLKWLQWKQCPLRYMPSSYNPLELAVMDLSESLIETLWKGRSNKVAEHLMVLNLSSCHRLTATPDLSGYLSLKKLNLEECSHLTRIHESLGNLNSLVHLNLRLCYNLIELPGEVSGLKQLEDLVLSGCWKLKALPKDLSCMVSLKQLLLDSTSITELPESIFHLTKLEKLSANGCHSLKRLPTCTGKLCSLQELSLNHTALEELPDSVGSLEKLEMLSLMGCKSLSVIPNSTGKLISMTQLFLNGSGIKELPASIGSLSYLRKLSVGDCTSLDKFPVSMELLVSIVELKLDGTKVSNFPDEIFVGMKMLEKLEMGKVQLLKFVPESFGCLSALTILDMHESNITELPESIGMLENLIGLRLDKCKQLQRLPNSIGNLKSLQWLMMKETEVTRLPDSFGMLRSLVELDMKRMPYLNNNGAGTNMSTVTIIPNIQEQPNSEAILSSFCNLTFLEKLNAHGWGIYGKIPDEFEKLSSLETLSLGHNNICSLPANMMSLSYLKKLLLSNCRELMFLPSLPSSLEELNLENCVAVQYIHDISNLERLEEFNLTNCEKVVDVPGLEHLKSLRRLYMSGCIGCSLAVKRRFSKVVLKKLEILIMPGSRVPDWFTAEPVVFSKRRNRELKGVIFFGVLSFKNIPENQRERLQLEDVQGKIFNLSSEVFSTTFRLLGVPGTNEDHIFLRRFGARTPLVFQLKDRYTLHLQMRNPPRVNGLELNNCRIHLVYYGDDDYEGDEGSLEESQFSVSQKLAKFFNFAAEDHACI 1385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01108 1385 ProSiteProfiles TIR domain profile. 14 176 IPR000157 GO:0007165
Viun2g01108 1385 Gene3D Ribonuclease Inhibitor 760 1050 IPR032675 -
Viun2g01108 1385 Gene3D Ribonuclease Inhibitor 1051 1206 IPR032675 -
Viun2g01108 1385 SMART till_3 15 149 IPR000157 GO:0007165
Viun2g01108 1385 Gene3D Ribonuclease Inhibitor 591 759 IPR032675 -
Viun2g01108 1385 Gene3D - 347 431 IPR042197 -
Viun2g01108 1385 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 440 IPR027417 -
Viun2g01108 1385 SUPERFAMILY L domain-like 909 1224 - -
Viun2g01108 1385 PRINTS Disease resistance protein signature 381 395 - -
Viun2g01108 1385 PRINTS Disease resistance protein signature 288 302 - -
Viun2g01108 1385 PRINTS Disease resistance protein signature 210 225 - -
Viun2g01108 1385 PRINTS Disease resistance protein signature 834 850 - -
Viun2g01108 1385 Pfam TIR domain 16 180 IPR000157 GO:0007165
Viun2g01108 1385 Pfam NB-ARC domain 192 414 IPR002182 GO:0043531
Viun2g01108 1385 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 808 IPR044974 GO:0006952
Viun2g01108 1385 ProSiteProfiles Leucine-rich repeat profile. 1099 1121 IPR001611 GO:0005515
Viun2g01108 1385 SMART LRR_typ_2 955 978 IPR003591 -
Viun2g01108 1385 SMART LRR_typ_2 907 930 IPR003591 -
Viun2g01108 1385 SMART LRR_typ_2 1097 1120 IPR003591 -
Viun2g01108 1385 SMART LRR_typ_2 766 789 IPR003591 -
Viun2g01108 1385 SMART LRR_typ_2 860 883 IPR003591 -
Viun2g01108 1385 SMART LRR_typ_2 1002 1024 IPR003591 -
Viun2g01108 1385 SMART LRR_typ_2 813 836 IPR003591 -
Viun2g01108 1385 SUPERFAMILY L domain-like 489 942 - -
Viun2g01108 1385 Gene3D - 13 172 IPR035897 -
Viun2g01108 1385 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 152 IPR035897 -
Viun2g01108 1385 Gene3D - 173 340 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01108 Viun-Chr2 21882300 21887539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01108 16 889 WRKY Transcription Factor Family AT4G12020 28.844 6.61e-83 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01108 - - gmx:100784137 2194.08