Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01092 ATGGCTAAAAACGAGTTGAAGCTTTTGGGTGCTTGGTTCAGTCCTTATGCCCTAAGAGTGCAGATTGCCCTTAATCTCAAGGGTGTAGATTATGAGGATATTGAAGAGACCTTGTTTCCCAAAAGTGAACTTCTTCTTAAGTCCAACCCTGTGCTCAAGAAAATCCCAGTTCTTTTCCATGCAGATAAAGTCATATGTGAATCTGCAATCATAGTTGAATACATTGACGAGGTTTGGACCCATGCTCCCTCCATCCTTCCACAAAATGCCTATGATCGAGCTCAGGCCAGATTTTGGGTTGGTTACATTGATCAAAAGTGGATTTCGTCCTTGAAAAACATCCTGATAGCTGAAGATGATGAGGCAAAAAAGCCAGACTTTGAGGAAATAGAGGAAATAGCTGAGAGGTTGGAAGAAGTGTTGAAGGGGAAGACATTTTTTGGAGGAGACACAATTGGATTCATTGATATTGTTTTTGGTAGCTTTCTGAGTTGGACCAGAGTGATAGAAAACATAAATGGAACAAAATTGATCGATGAAACCAAGCAACCAAGTTTGTTCCAATGGGCTGAAACATTTGCTGTTCATCCTGCTGTCAAAGGCCTTCTCCCAGAAATTGACAAACTTGTTGAATTTGCAAAGATTTTAAAGCTAAGTTTAGCTGCTGCAAAGTAA 675 0.4015 MAKNELKLLGAWFSPYALRVQIALNLKGVDYEDIEETLFPKSELLLKSNPVLKKIPVLFHADKVICESAIIVEYIDEVWTHAPSILPQNAYDRAQARFWVGYIDQKWISSLKNILIAEDDEAKKPDFEEIEEIAERLEEVLKGKTFFGGDTIGFIDIVFGSFLSWTRVIENINGTKLIDETKQPSLFQWAETFAVHPAVKGLLPEIDKLVEFAKILKLSLAAAK 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01092 224 Pfam Glutathione S-transferase, N-terminal domain 5 77 IPR004045 -
Viun2g01092 224 SFLD Main (cytGST) 2 221 - -
Viun2g01092 224 SFLD Main.3: Omega- and Tau-like 2 221 IPR045073 -
Viun2g01092 224 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 211 IPR045073 -
Viun2g01092 224 SUPERFAMILY Thioredoxin-like 5 107 IPR036249 -
Viun2g01092 224 SUPERFAMILY GST C-terminal domain-like 77 216 IPR036282 -
Viun2g01092 224 Gene3D Glutaredoxin 1 85 - -
Viun2g01092 224 Pfam Glutathione S-transferase, C-terminal domain 104 196 IPR004046 -
Viun2g01092 224 Gene3D - 86 224 - -
Viun2g01092 224 FunFam Glutathione S-transferase U9 86 223 - -
Viun2g01092 224 FunFam Glutathione S-transferase GSTU6 1 86 - -
Viun2g01092 224 CDD GST_N_Tau 6 79 - -
Viun2g01092 224 CDD GST_C_Tau 90 216 IPR045074 GO:0004364|GO:0006749
Viun2g01092 224 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 216 IPR010987 -
Viun2g01092 224 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01092 Viun-Chr2 21769964 21770991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01092 1 216 Glutathione S-transferase Gene Family AT1G10360 54.751 8.40e-81 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01092 K00799 - gmx:547576 320.472