Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01036 ATGGAAGAGGCCAGAGAAGAAAACAAGATGTTGAAGTTCTTGGACATTTTTCAGCAAGAAAAACCTGAAGATGCTGCAAATGCTAGAGGCGTAACTAGCCATGAGGAAAGTGAAGAGAGTGAACTTGTGTCACTTTCTCTTGGGATATCACTCAATAGAAAGACTAAGGGTGAGAGAAAACATTGCAGAAGAGAAGATGAGGGTATGGATAAAGGACTCACACTTGGGTTAGATATCAATTTGGATCCTGTGAATTTTGCTGAAGCTGCAATTTGCAGCACTGCAAGTAGCTTTGGTGAGGGAGGGAAGGAAGAGGAACCAAGTGAGATGTGGCCACCCAGTAAAGTTTTGAAGGGAATGAAAAATTTGGATAAAAGTGAAGCTTCTCAAAATGATCAGCCCAAGAAAACTAGGGTTTCCATCAGAGCCAGATGTGATACTCAAACGATGAATGATGGGTGTCAATGGAGAAAATATGGACAGAAAATGGCAAAAGGAAATCCATGTCCCCGAGCTTACTATCGATGCACCATTTCTCCATTGTGTCCTGTAAGAAAACAGGTGCAAAGATGTGCTGAAGACATGTCCATATTGATCACAACCTATGAAGGAATCCACAATCATCCACTTCCTATATCAGCCACTGCAATGGCCTGCACAACTTCTGCTGCAGCTTCTATGCTCCAATCTCCTTCATTGAGTTCACAGCATGGACATGGAATAGTGAATTCAGCTATATCCTCCATTACCAACTTCACTGCTCCTAATTACAACCTTGATAATGCTCTAAACTTCTCCACATACCAAGTTTCAAGACCACATCAATTCTACTTTCCAAACTCATCTATTTCAAGCTTGAATTCTCACCCCACAATCACTTTGGACCTTACAGCACCCCCAACATCCTCAAACTCAACCTTCACTCACATGCCAAAATACTCATCAACAACAACAAACCTTAATTTTTCCTCAGGTTTCTCTCCTCTACAATCTAGCATGCCTTCATCACCTTGGAGCAGTTACAGTGGTCACTTCAACTCAGGAACACCGACTCATAACAGAAACCATGGTGATTACTTGTTAAACACTGGAACTCAAAATCAGCCATATCTTGAGCAACTTCATCACCCTATTTGCACGAGCAACAACAACTTGTCTTTGCCGGATTCCATTATTGCTGCAACCAAGGCAATCACAAGCAATCCAAAATTTCAATCAGTGTTGGCAACTGCTCTCACAACATATGTTGGCAATGAAGCCGGTGGTGTTAGGTTAAGAGAAAACCATGTTCTTGAGAATTCAGAACTGAACTTAAAGCTATGTAGTGAAAATAGCATGGGATGTGCATCATCCAGGTACTTCAATGTGTCTTCTTCTGCTCTTAACCCTCAACAAGGAAACTCAAGTATATTTCCACTACCATTACCTGGGCAATGGAAGTAA 1443 0.4151 MEEAREENKMLKFLDIFQQEKPEDAANARGVTSHEESEESELVSLSLGISLNRKTKGERKHCRREDEGMDKGLTLGLDINLDPVNFAEAAICSTASSFGEGGKEEEPSEMWPPSKVLKGMKNLDKSEASQNDQPKKTRVSIRARCDTQTMNDGCQWRKYGQKMAKGNPCPRAYYRCTISPLCPVRKQVQRCAEDMSILITTYEGIHNHPLPISATAMACTTSAAASMLQSPSLSSQHGHGIVNSAISSITNFTAPNYNLDNALNFSTYQVSRPHQFYFPNSSISSLNSHPTITLDLTAPPTSSNSTFTHMPKYSSTTTNLNFSSGFSPLQSSMPSSPWSSYSGHFNSGTPTHNRNHGDYLLNTGTQNQPYLEQLHHPICTSNNNLSLPDSIIAATKAITSNPKFQSVLATALTTYVGNEAGGVRLRENHVLENSELNLKLCSENSMGCASSRYFNVSSSALNPQQGNSSIFPLPLPGQWK 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01036 480 MobiDBLite consensus disorder prediction 17 42 - -
Viun2g01036 480 Pfam WRKY DNA -binding domain 151 209 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun2g01036 480 SUPERFAMILY WRKY DNA-binding domain 143 211 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun2g01036 480 MobiDBLite consensus disorder prediction 27 41 - -
Viun2g01036 480 MobiDBLite consensus disorder prediction 97 116 - -
Viun2g01036 480 FunFam probable WRKY transcription factor 31 135 212 - -
Viun2g01036 480 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 5 424 IPR044810 GO:0003700
Viun2g01036 480 Gene3D WRKY domain 135 212 IPR036576 GO:0003700|GO:0006355|GO:0043565
Viun2g01036 480 SMART WRKY_cls 150 210 IPR003657 GO:0003700|GO:0006355|GO:0043565
Viun2g01036 480 ProSiteProfiles WRKY domain profile. 145 211 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01036 Viun-Chr2 21231817 21234049 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01036 1 454 WRKY Transcription Factor Family AT5G15130 34.489 2.53e-60 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Viun2g01036 WRKY 1.9e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01036 - - pvu:PHAVU_002G089700g 685.641