Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01011 ATGAACGTGGATCTGGAGTCATTAGCAGAGGCCACTTCTGGGGCCATAGGATCACTCATCAGCACCACTATTCTCTACCCGCTTGACACCTGCAAGACCAAGTACCAAGCCGATGCTCGTTCCCATGGTCGCACCAGATACAGGAATCTCACTGATGTATTATTGGAGGCAATATCTAACGGTCAGGTGCTTTCACTTTACCAGGGCCTTGGAACAAAGAATCTTCAATCCTTCATTTCGCAGTTTGTCTACTTCTATGGATACAGTTATTTTAAAAGATTATATCTAGACAAAAGTGGTTATAGATCCATCGGAACGAAAGCAAACTTAGTTATTGCTGCTGCTGCTGGGGCTTGCACTGCCATTGTGACTCAGCCCCTGGACACAGCCTCCTCAAGGATGCAGACAAGTGCATTTGGAAAGTCTAAAGGGCTACTGAAAACCCTTACCGAAGGAACCTGGAGTGACGCATTTGATGGCCTCAGTATTTCCTTGCTGCTCACATCAAACCCTGCAATTCAGTATACCGTGTTTGATCAGCTGAAACAGCGAGCACTGCAGAACAAACAAAGCAAAGCTGAAAAGGGATCATCTCCCGAATCCCTTTCTGCATTTATGGCCTTTCTTTTAGGTGCAATTTCAAAAAGCATTGCTACATGTCTTACATATCCAGCTATCAGGTGCAAAGTTATCATTCAAGCTGCTGACTCAGATGAAGCAAACTCCAAAACAAAGACAAAATCACAGAAAACAGTGTCTAGTGTTCTCTATGGAATATGGAAAAGAGAGGGGATAGTGGGATATTTCAAAGGATTGCATGCTCAGATCTTAAAGACTGTTTTGAGCTCAGCACTGCTCTTAATGATCAAGGAGAAGATCTCAGCTAGTACTTGGGTGCTTATCCTTGCACTTAAAAGGTACCTATTACGTCCAGCGAGAAGGGTTAAGAACTTGTAA 957 0.4368 MNVDLESLAEATSGAIGSLISTTILYPLDTCKTKYQADARSHGRTRYRNLTDVLLEAISNGQVLSLYQGLGTKNLQSFISQFVYFYGYSYFKRLYLDKSGYRSIGTKANLVIAAAAGACTAIVTQPLDTASSRMQTSAFGKSKGLLKTLTEGTWSDAFDGLSISLLLTSNPAIQYTVFDQLKQRALQNKQSKAEKGSSPESLSAFMAFLLGAISKSIATCLTYPAIRCKVIIQAADSDEANSKTKTKSQKTVSSVLYGIWKREGIVGYFKGLHAQILKTVLSSALLLMIKEKISASTWVLILALKRYLLRPARRVKNL 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01011 318 ProSiteProfiles Solute carrier (Solcar) repeat profile. 104 184 IPR018108 -
Viun2g01011 318 FunFam Peroxisomal adenine nucleotide carrier 1 3 297 - -
Viun2g01011 318 ProSiteProfiles Solute carrier (Solcar) repeat profile. 202 296 IPR018108 -
Viun2g01011 318 PRINTS Mitochondrial carrier protein signature 113 135 IPR002067 GO:0055085
Viun2g01011 318 PRINTS Mitochondrial carrier protein signature 20 38 IPR002067 GO:0055085
Viun2g01011 318 PRINTS Mitochondrial carrier protein signature 67 85 IPR002067 GO:0055085
Viun2g01011 318 Gene3D Mitochondrial carrier domain 2 297 IPR023395 -
Viun2g01011 318 PANTHER PEROXISOMAL ADENINE NUCLEOTIDE TRANSPORTER 1 1 317 IPR045900 GO:0005347|GO:0006635|GO:0015217
Viun2g01011 318 SUPERFAMILY Mitochondrial carrier 7 292 IPR023395 -
Viun2g01011 318 ProSiteProfiles Solute carrier (Solcar) repeat profile. 5 94 IPR018108 -
Viun2g01011 318 Pfam Mitochondrial carrier protein 105 186 IPR018108 -
Viun2g01011 318 Pfam Mitochondrial carrier protein 6 98 IPR018108 -
Viun2g01011 318 Pfam Mitochondrial carrier protein 202 293 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01011 Viun-Chr2 20794484 20798158 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g01011 23 311 Chloroplast and Mitochondria Gene Families AT1G25380 25.413 1.23e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01011 - - gmx:100301879 553.903