LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Viun2g00996	ATGGAAAATGTGGAAGCCACCCATACATTAGGACTAAATGACATTTCCTTGTACGGGGACGACCAAAGTCAAGCAACCACTGCGACGTTGGTACCCAATAGCTGTAATAACAAAGGTGGTGACTTAGACCAACATAGGCACCCCACTGTTAGGATGTGGTTCGAAACAGAGGACGAGGTAAAAAAAATTTACAAGAACTATGCTATTCGAAAAGGTTTTGAAGTGAGGATAAGAACTTCACAAAAGGATCTGGATGGGAACATTTCGTATTTGAAGTTAGTGTGCTCGCGGGAAGGAAAATATGTGTCCGCAATCCCTCCAGAAAAGAAGACACTACGTACCCAAAGGAAGAATTGTCCTGCTCAAATGACTGCATTTAAAAGAGAAGGAAAATGGTGCATTAAAACTTTGGTGGACGAACACAGTCACGATATTAGCCCAGGAAAGTCAAGGCTAATTAGAGGTAATAGAATCATCAGTATGCATGCAAAGAGAACCTTTGACATAAATGACGAGGCGGGAGTGCGCATCAACAAGAGTTTTCGATCGTTGGTTTTTTATGCAGGCGGTTATGAGAACCTGGAGTTTGTTGAGCGTGACGTTAGAAACTACTTAGGGGTCAAGCGGCGTGCTCTTGGAAAAAATGGGGACGGCCAAGCATTGCTAAATCACTTTTCCCGCATGAGAGAACTAAACAGTAATTTCTTTTATGAGATTGACTTGGACTCCGAAGATCGTATCCGTAACATTTTTTGGGCAGATGCAAGGAGTCGATCTGCATGTCATGATTTCGGAGACGTTGTGTCCTTTGATACAACTTACCTAACAAACAAATATGACATGCCCTTTGCACCGTTTGTGGGGATTAACCACCACGGTCAATCAATTTTATTAGGATGTGGATTACTGTCTAAGGAAGACACAACGGAAATTGTAATCAATGGAAATTTGCAGAACAATGGTTCTCTCACCGTGGAGAAGAAAAGCTTTAAGAGCGGGCCAAAAATGAACTCCAGCGCGGGAGCAGTTCTATGA	1035	0.4261	MENVEATHTLGLNDISLYGDDQSQATTATLVPNSCNNKGGDLDQHRHPTVRMWFETEDEVKKIYKNYAIRKGFEVRIRTSQKDLDGNISYLKLVCSREGKYVSAIPPEKKTLRTQRKNCPAQMTAFKREGKWCIKTLVDEHSHDISPGKSRLIRGNRIISMHAKRTFDINDEAGVRINKSFRSLVFYAGGYENLEFVERDVRNYLGVKRRALGKNGDGQALLNHFSRMRELNSNFFYEIDLDSEDRIRNIFWADARSRSACHDFGDVVSFDTTYLTNKYDMPFAPFVGINHHGQSILLGCGLLSKEDTTEIVINGNLQNNGSLTVEKKSFKSGPKMNSSAGAVL	344

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Viun2g00996	344	Pfam	MULE transposase domain	267	309	IPR018289	-
	Viun2g00996	344	PANTHER	OS01G0519700 PROTEIN	44	312	-	-
	Viun2g00996	344	Pfam	FAR1 DNA-binding domain	63	146	IPR004330	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Viun2g00996	Viun-Chr2	20646060	20648295	Transposed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Viun2g00996		FAR1	2e-12	CL0274

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Viun2g00996	-		-	vun:114174566	702.59