Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g00989 ATGCGCCGATCGACTGCCCGTACTCGTGCCGGTTCGAATCGCAACGACGAAATGGATCCGATCAAAACACGCTCCACCAACCTCTTCGCTCGCAACCCTAAGTCCGCTCCATCGCGTTCCCTATCTTCCGTTCTCCTCCTCATTCTCGCGCTCTCGTTCCTCTTCCTCCTCTCCTACTGCGCGTTCTCCCACTCTGAAATTAGTTTCCGGTACCGGATCATCGTCGACGGCGGGAGCACTGGCACCCGCGTGCACGTGTTTAAGTACCGGTCGGGCAGCCCGTTGCAGTTCGGGAAGGAGAGTTTGGCCTCGATGCGCGTTAACCCGGGGCTGTCGGCGTTCGCGAAGGATCCGGATGGGGCGGGCGTGTCGGTATCGGAGCTGGTGGAATTCGCGAAAGGGCGGATCCCGAGGGTGAGTTGGGGGGAGACGGAGATTCGGTTGATGGCAACGGCAGGGTTGAGAATGCTGGACGCGGAGGTGCAGGAAAGGATTCTGCAGTCGTGTAGGAAGGTGTTGCGTAACTCCGGGTTCAAGTTTATGGACCATTGGGCTTCTGTTATCACAGGTTCTGATGAAGGAGTTTATGCTTGGGTTGTTGCTAATTATGCACTTGGCACTCTTGGAGGTGATCCTTTGGATACAACTGGGATTGTTGAACTTGGTGGTGCTTCTGCTCAGGTGACCTTTGTATCAAGAGAACCGGTGCTTCCTTCTTTCTCAAGAACTGTTAAATTTGGGAATATCACTTACAAGCTTTACAGCCACAGCTTTCTTCATTTTGGCCTGAATGTTGCTCACGACTCATGGAAAGAAGGACTTGTATCAGGAAAATTTGGCTTGGCTTCTCAATCTCTTCAAGAAAGGTTGCGGATAGATCCTTGTACTCCTACTGGATACTCTTACAGTGCTGAGTCATTGAAGTTACCTCCTAGCTCGGAGAGTGAAAAGGTCCGTTCTCTTTTCACTGTCCAAACAATGGGGAACTTTTCAGAGTGCAGATCGGCAGCACTTATGTTGCTACAAAAAGGGAAAGAATCATGCTCCCATCAACACTGTCACATGGGATCAACGTTCATACCAAATCTTCAGGGGAATTTTCTGGCCACAGAAAATTTCTATCACACATCAAAGTTTTTTGGATTGCGGCCGAAGGCCTATCTGTCCAAGTTGATGACTGCTGGGCAAGAATTCTGTGGAGAGGATTGGTTAAGGCTGAAGGAAAAATATGTTTCCCATAATGAGGAAGATTTACTTCGGTATTGCTTCTCTTCAGCATATATTGTTGCTATGCTTCACGACAGTCTTGGAATTGCTTTGGATGATGAGAGGTATTCTTGTTTTTTATTTAAGGGTCAAGGTTGCTAG 1368 0.4912 MRRSTARTRAGSNRNDEMDPIKTRSTNLFARNPKSAPSRSLSSVLLLILALSFLFLLSYCAFSHSEISFRYRIIVDGGSTGTRVHVFKYRSGSPLQFGKESLASMRVNPGLSAFAKDPDGAGVSVSELVEFAKGRIPRVSWGETEIRLMATAGLRMLDAEVQERILQSCRKVLRNSGFKFMDHWASVITGSDEGVYAWVVANYALGTLGGDPLDTTGIVELGGASAQVTFVSREPVLPSFSRTVKFGNITYKLYSHSFLHFGLNVAHDSWKEGLVSGKFGLASQSLQERLRIDPCTPTGYSYSAESLKLPPSSESEKVRSLFTVQTMGNFSECRSAALMLLQKGKESCSHQHCHMGSTFIPNLQGNFLATENFYHTSKFFGLRPKAYLSKLMTAGQEFCGEDWLRLKEKYVSHNEEDLLRYCFSSAYIVAMLHDSLGIALDDERYSCFLFKGQGC 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g00989 455 MobiDBLite consensus disorder prediction 1 37 - -
Viun2g00989 455 CDD NBD_sugar-kinase_HSP70_actin 73 249 - -
Viun2g00989 455 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 42 442 IPR000407 GO:0016787
Viun2g00989 455 Gene3D Exopolyphosphatase. Domain 2 191 445 - -
Viun2g00989 455 Pfam GDA1/CD39 (nucleoside phosphatase) family 69 439 IPR000407 GO:0016787
Viun2g00989 455 Gene3D - 61 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g00989 Viun-Chr2 20583312 20589549 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun2g00989 39 438 Nodulin-like Gene Family AT4G19180 27.146 9.62e-39 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g00989 K01510 - gmx:100807287 671.003